Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3841
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY359126-1|AAQ89483.1|  160|Homo sapiens INPE5792 protein.             30   7.2  
X96586-1|CAA65405.1|  917|Homo sapiens FAN protein protein.            29   9.5  
BC041124-1|AAH41124.1|  917|Homo sapiens neutral sphingomyelinas...    29   9.5  

>AY359126-1|AAQ89483.1|  160|Homo sapiens INPE5792 protein.
          Length = 160

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
 Frame = +2

Query: 383 GREGHQGASFLWTNGTLFD----QAKFACDW 463
           G    QG S+ WTNGT F+     +K++C+W
Sbjct: 117 GLSRKQGDSWKWTNGTTFNGWPSNSKWSCNW 147


>X96586-1|CAA65405.1|  917|Homo sapiens FAN protein protein.
          Length = 917

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 464 WDNVDWSQAIEHYKLNADPLEKNPTCRNRNQKFTRNNQKSTISL 595
           W+N+   Q  EHYK++ + +      RN +  FT  +Q ST+ +
Sbjct: 614 WNNITKLQLHEHYKIHKEAVTGITVSRNGSSVFT-TSQDSTLKM 656


>BC041124-1|AAH41124.1|  917|Homo sapiens neutral sphingomyelinase
           (N-SMase) activation associated factor protein.
          Length = 917

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 464 WDNVDWSQAIEHYKLNADPLEKNPTCRNRNQKFTRNNQKSTISL 595
           W+N+   Q  EHYK++ + +      RN +  FT  +Q ST+ +
Sbjct: 614 WNNITKLQLHEHYKIHKEAVTGITVSRNGSSVFT-TSQDSTLKM 656


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,806,427
Number of Sequences: 237096
Number of extensions: 2124947
Number of successful extensions: 6147
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6120
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)