Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3837
         (574 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093854-1|AAH93854.1|  836|Homo sapiens transmembrane and tetra...    33   0.94 
BC093852-1|AAH93852.1|  836|Homo sapiens transmembrane and tetra...    33   0.94 
AK074634-1|BAC11102.1|  408|Homo sapiens BUNIT (EC 2.4.1.-).  pr...    33   0.94 

>BC093854-1|AAH93854.1|  836|Homo sapiens transmembrane and
           tetratricopeptide repeat containing 2 protein.
          Length = 836

 Score = 32.7 bits (71), Expect = 0.94
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 461 KRFSFSLVLFGTKSLIRIFGKKANIKSGTWKEKK 562
           KRF  SL+ + T +LI  +G K  I++G W+ ++
Sbjct: 448 KRFLKSLIFYATATLIVFYGLKTAIRNGDWQNEE 481


>BC093852-1|AAH93852.1|  836|Homo sapiens transmembrane and
           tetratricopeptide repeat containing 2 protein.
          Length = 836

 Score = 32.7 bits (71), Expect = 0.94
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 461 KRFSFSLVLFGTKSLIRIFGKKANIKSGTWKEKK 562
           KRF  SL+ + T +LI  +G K  I++G W+ ++
Sbjct: 448 KRFLKSLIFYATATLIVFYGLKTAIRNGDWQNEE 481


>AK074634-1|BAC11102.1|  408|Homo sapiens BUNIT (EC 2.4.1.-).
           protein.
          Length = 408

 Score = 32.7 bits (71), Expect = 0.94
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 461 KRFSFSLVLFGTKSLIRIFGKKANIKSGTWKEKK 562
           KRF  SL+ + T +LI  +G K  I++G W+ ++
Sbjct: 20  KRFLKSLIFYATATLIVFYGLKTAIRNGDWQNEE 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,230,015
Number of Sequences: 237096
Number of extensions: 1066422
Number of successful extensions: 1621
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)