Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3835
         (616 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0450 - 10381360-10381391,10381737-10382283,10382770-103829...    29   3.9  
08_01_0758 - 7193287-7193871,7193965-7194421,7194437-7194655,719...    28   6.8  

>02_02_0450 -
           10381360-10381391,10381737-10382283,10382770-10382952,
           10383123-10383863
          Length = 500

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 137 VILLGRPTVDFMTW*LRPFKVKVKSYFYFND 229
           ++ L   T ++ TW  + FK+K+ + F+FND
Sbjct: 444 IVPLSCITQEYFTWSKKLFKLKLLALFFFND 474


>08_01_0758 -
           7193287-7193871,7193965-7194421,7194437-7194655,
           7194881-7195419
          Length = 599

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 140 ILLGRPTVDFMTW*LRPFKVKVKSYFYFND 229
           +LL   T  + TW  + FK+K+ + F+FND
Sbjct: 511 VLLSCITQVYFTWSKQLFKLKLLALFFFND 540


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,981,482
Number of Sequences: 37544
Number of extensions: 250027
Number of successful extensions: 450
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)