Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3835
         (616 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF242296-1|AAF59842.1| 1619|Drosophila melanogaster mechanosenso...    32   0.71 
AE014134-916|AAF52248.3| 1619|Drosophila melanogaster CG11020-PA...    32   0.71 
BT029934-1|ABM92808.1| 1442|Drosophila melanogaster IP14638p pro...    30   2.9  
AE013599-3499|AAF46925.1| 1439|Drosophila melanogaster CG3695-PA...    30   2.9  

>AF242296-1|AAF59842.1| 1619|Drosophila melanogaster mechanosensory
            transduction channelNOMPC protein.
          Length = 1619

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -3

Query: 422  NFSGSSKKSTEKISVNDHHFTEIILHPISSHLMSFHFVF 306
            NFS    +S EK + N  +F+++ +HPI+S  + F  VF
Sbjct: 1467 NFSPEDLRSFEKKNRNRGYFSDVRMHPINSFELLFFAVF 1505


>AE014134-916|AAF52248.3| 1619|Drosophila melanogaster CG11020-PA,
            isoform A protein.
          Length = 1619

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -3

Query: 422  NFSGSSKKSTEKISVNDHHFTEIILHPISSHLMSFHFVF 306
            NFS    +S EK + N  +F+++ +HPI+S  + F  VF
Sbjct: 1467 NFSPEDLRSFEKKNRNRGYFSDVRMHPINSFELLFFAVF 1505


>BT029934-1|ABM92808.1| 1442|Drosophila melanogaster IP14638p protein.
          Length = 1442

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 499  ITHLNLKKHYLDKINQNTQLHSSRSHQKVPVK 594
            ITHLNL+  + +KIN NT  ++  S  + P++
Sbjct: 1326 ITHLNLEDIHTEKINDNTSNNAITSQTQSPMQ 1357


>AE013599-3499|AAF46925.1| 1439|Drosophila melanogaster CG3695-PA
            protein.
          Length = 1439

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 499  ITHLNLKKHYLDKINQNTQLHSSRSHQKVPVK 594
            ITHLNL+  + +KIN NT  ++  S  + P++
Sbjct: 1324 ITHLNLEDIHTEKINDNTSNNAITSQTQSPMQ 1355


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,993,031
Number of Sequences: 53049
Number of extensions: 442054
Number of successful extensions: 1022
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)