Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3824
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73973-5|CAA98267.2|  882|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    29   3.8  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    29   3.8  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z77652-5|CAB01118.2|  646|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domai...    27   8.8  
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AY652942-1|AAT73709.1|  684|Caenorhabditis elegans guanylate cyc...    27   8.8  
AJ133597-1|CAC35530.1|  684|Caenorhabditis elegans soluble guany...    27   8.8  

>Z73973-5|CAA98267.2|  882|Caenorhabditis elegans Hypothetical
           protein F25D1.4 protein.
          Length = 882

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +2

Query: 44  LALIFYF--FITETVLSDKVRNVLLLLADDGGFEIGAY 151
           L + FYF  F  ET+L ++  N+ LLLA+ GG  IG Y
Sbjct: 816 LHIKFYFAHFKQETILQERSYNLFLLLAEIGG-TIGLY 852


>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
           protein F12F6.6 protein.
          Length = 1126

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = +3

Query: 201 GPGGSTMPFTFSEPVASPNSASTS*LGSPSHPEM-GNVPGLAP 326
           GPGG  MP +F+     P        G P  P M G  PG  P
Sbjct: 304 GPGGPGMPGSFAPGAPGPGGPGGYPSGGPGMPGMQGGYPGGPP 346


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
            protein 44, isoform f protein.
          Length = 6994

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = +3

Query: 156  TKYVKRPNIDELTRNGPGGSTM---PFTFSEPVASPNSASTS*LGSPSHPEMGNVPGLAP 326
            T+   RP +D    + P  S M   P T  E +  P+S+  S  GS  H     VP +  
Sbjct: 3045 TREFDRPELDSERLSEPAQSPMEVSPITTEENIVRPSSSVKSEYGSEGH-----VPSVIE 3099

Query: 327  TASTT 341
            T +TT
Sbjct: 3100 TKTTT 3104


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
            protein.
          Length = 6994

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = +3

Query: 156  TKYVKRPNIDELTRNGPGGSTM---PFTFSEPVASPNSASTS*LGSPSHPEMGNVPGLAP 326
            T+   RP +D    + P  S M   P T  E +  P+S+  S  GS  H     VP +  
Sbjct: 3045 TREFDRPELDSERLSEPAQSPMEVSPITTEENIVRPSSSVKSEYGSEGH-----VPSVIE 3099

Query: 327  TASTT 341
            T +TT
Sbjct: 3100 TKTTT 3104


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
           protein K08E7.5a protein.
          Length = 1221

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/65 (26%), Positives = 25/65 (38%)
 Frame = +3

Query: 198 NGPGGSTMPFTFSEPVASPNSASTS*LGSPSHPEMGNVPGLAPTASTTFNFLRQRDQSAE 377
           N  G  T P T ++   +PNS  T    S S    G  PG  P +   ++       ++ 
Sbjct: 279 NMAGNPTAPLTTTQHTFAPNSTET----SRSSTSRGKAPGTEPKSEARYSSQNPYSDNSS 334

Query: 378 LTAPE 392
              PE
Sbjct: 335 TQKPE 339


>Z77652-5|CAB01118.2|  646|Caenorhabditis elegans Hypothetical
           protein C06B3.8 protein.
          Length = 646

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +1

Query: 331 RPPLSTSFDNVTSLPNLLRQNGIMTGIIGKKHVGPSSVYQFDYE-QTEENNHINQVGRNI 507
           RP +   F+N+ +  N +    + T  + KKH+   S  +   E +T + +  N++ +  
Sbjct: 239 RPQIPLDFENICNFINAVFVLQVKTSPLKKKHMDAMSQEELKQEMETLDEDATNELTQG- 297

Query: 508 THMKLLAREFIASANK 555
            H+KL  +  + ++ K
Sbjct: 298 HHLKLKGQMMLLASKK 313


>U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein 2 protein.
          Length = 452

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +1

Query: 364 TSLPNLLRQNGIMTGIIGKKHVGPSSVYQFDYEQTEENNHINQVGRNI 507
           T++  +L++ G  TG++GK H+G +     D            VG N+
Sbjct: 119 TTMAEMLQEAGYATGMVGKWHLGINENNATDGAHLPSKRGFEYVGVNL 166


>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
            C41A3.1 protein.
          Length = 7829

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -3

Query: 235  LNVKGIVEPPGPFRVNSSIFGRLTYFVAIRAYLKTAI 125
            LN KGI EP  P    +S+ GR     A+RA +   I
Sbjct: 2874 LNEKGITEPSEPNTPKTSLRGRKLSIPAVRAQVLAQI 2910


>AY652942-1|AAT73709.1|  684|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 684

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +1

Query: 331 RPPLSTSFDNVTSLPNLLRQNGIMTGIIGKKHVGPSSVYQFDYE-QTEENNHINQVGRNI 507
           RP +   F+N+ +  N +    + T  + KKH+   S  +   E +T + +  N++ +  
Sbjct: 277 RPQIPLDFENICNFINAVFVLQVKTSPLKKKHMDAMSQEELKQEMETLDEDATNELTQG- 335

Query: 508 THMKLLAREFIASANK 555
            H+KL  +  + ++ K
Sbjct: 336 HHLKLKGQMMLLASKK 351


>AJ133597-1|CAC35530.1|  684|Caenorhabditis elegans soluble
           guanylate cyclase protein.
          Length = 684

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
 Frame = +1

Query: 331 RPPLSTSFDNVTSLPNLLRQNGIMTGIIGKKHVGPSSVYQFDYE-QTEENNHINQVGRNI 507
           RP +   F+N+ +  N +    + T  + KKH+   S  +   E +T + +  N++ +  
Sbjct: 277 RPQIPLDFENICNFINAVFVLQVKTSPLKKKHMDAMSQEELKQEMETLDEDATNELTQG- 335

Query: 508 THMKLLAREFIASANK 555
            H+KL  +  + ++ K
Sbjct: 336 HHLKLKGQMMLLASKK 351


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,674,567
Number of Sequences: 27780
Number of extensions: 351422
Number of successful extensions: 977
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)