Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3823
(634 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein. 147 3e-35
BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation ... 147 3e-35
AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eI... 147 3e-35
AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein. 146 8e-35
L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein. 145 1e-34
CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein. 145 1e-34
BT006645-1|AAP35291.1| 113|Homo sapiens putative translation in... 145 1e-34
BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation ... 145 1e-34
BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation ... 145 1e-34
AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1... 145 1e-34
AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein. 145 1e-34
AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein. 145 1e-34
AF100737-1|AAD19900.1| 113|Homo sapiens putative translation in... 144 3e-34
CR533566-1|CAG38597.1| 552|Homo sapiens LOC56926 protein. 30 5.9
BC019091-1|AAH19091.2| 563|Homo sapiens nicalin homolog (zebraf... 30 5.9
BC013283-1|AAH13283.2| 563|Homo sapiens nicalin homolog (zebraf... 30 5.9
BC010064-1|AAH10064.2| 563|Homo sapiens nicalin homolog (zebraf... 30 5.9
BC008920-1|AAH08920.2| 350|Homo sapiens NCLN protein protein. 30 5.9
BC007275-1|AAH07275.1| 273|Homo sapiens NCLN protein protein. 30 5.9
AK172848-1|BAD18812.1| 563|Homo sapiens protein ( Homo sapiens ... 30 5.9
>CR542223-1|CAG47019.1| 113|Homo sapiens GC20 protein.
Length = 113
Score = 147 bits (356), Expect = 3e-35
Identities = 63/83 (75%), Positives = 77/83 (92%)
Frame = +2
Query: 47 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 226
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQR 90
Query: 227 ENICQWLTKSGLVKPEQLKVHGF 295
+NICQ+L + G+VK EQLKVHGF
Sbjct: 91 KNICQFLLEVGIVKEEQLKVHGF 113
>BC006996-1|AAH06996.1| 113|Homo sapiens eukaryotic translation
initiation factor 1B protein.
Length = 113
Score = 147 bits (356), Expect = 3e-35
Identities = 63/83 (75%), Positives = 77/83 (92%)
Frame = +2
Query: 47 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 226
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQR 90
Query: 227 ENICQWLTKSGLVKPEQLKVHGF 295
+NICQ+L + G+VK EQLKVHGF
Sbjct: 91 KNICQFLLEVGIVKEEQLKVHGF 113
>AF263452-1|AAF79182.1| 113|Homo sapiens translational factor eIF-1
protein.
Length = 113
Score = 147 bits (356), Expect = 3e-35
Identities = 63/83 (75%), Positives = 77/83 (92%)
Frame = +2
Query: 47 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 226
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQR 90
Query: 227 ENICQWLTKSGLVKPEQLKVHGF 295
+NICQ+L + G+VK EQLKVHGF
Sbjct: 91 KNICQFLLEVGIVKEEQLKVHGF 113
>AF064607-1|AAC17112.1| 113|Homo sapiens GC20 protein protein.
Length = 113
Score = 146 bits (353), Expect = 8e-35
Identities = 69/101 (68%), Positives = 85/101 (84%), Gaps = 3/101 (2%)
Frame = +2
Query: 2 ADAIKSSEDDVQDGL---VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGT 172
ADA K +D + GL +H+RIQQRNG KTLTTVQG++ +YD KK+V+A KK+FACNGT
Sbjct: 14 ADATKG-DDLLPAGLEDYIHIRIQQRNGGKTLTTVQGIADDYDKKKLVKAFKKKFACNGT 72
Query: 173 VVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 295
V+EHPEYGEV+QLQGDQR+NICQ+L + G+VK EQLKVHGF
Sbjct: 73 VIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
>L26247-1|AAA60602.1| 113|Homo sapiens sui1iso1 protein.
Length = 113
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 76/83 (91%)
Frame = +2
Query: 47 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 226
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQR 90
Query: 227 ENICQWLTKSGLVKPEQLKVHGF 295
+NICQ+L + GL K +QLKVHGF
Sbjct: 91 KNICQFLVEIGLAKDDQLKVHGF 113
>CR457051-1|CAG33332.1| 113|Homo sapiens SUI1 protein.
Length = 113
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 76/83 (91%)
Frame = +2
Query: 47 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 226
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQR 90
Query: 227 ENICQWLTKSGLVKPEQLKVHGF 295
+NICQ+L + GL K +QLKVHGF
Sbjct: 91 KNICQFLVEIGLAKDDQLKVHGF 113
>BT006645-1|AAP35291.1| 113|Homo sapiens putative translation
initiation factor protein.
Length = 113
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 76/83 (91%)
Frame = +2
Query: 47 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 226
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQR 90
Query: 227 ENICQWLTKSGLVKPEQLKVHGF 295
+NICQ+L + GL K +QLKVHGF
Sbjct: 91 KNICQFLVEIGLAKDDQLKVHGF 113
>BC008710-1|AAH08710.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 76/83 (91%)
Frame = +2
Query: 47 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 226
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQR 90
Query: 227 ENICQWLTKSGLVKPEQLKVHGF 295
+NICQ+L + GL K +QLKVHGF
Sbjct: 91 KNICQFLVEIGLAKDDQLKVHGF 113
>BC005118-1|AAH05118.1| 113|Homo sapiens eukaryotic translation
initiation factor 1 protein.
Length = 113
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 76/83 (91%)
Frame = +2
Query: 47 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 226
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQR 90
Query: 227 ENICQWLTKSGLVKPEQLKVHGF 295
+NICQ+L + GL K +QLKVHGF
Sbjct: 91 KNICQFLVEIGLAKDDQLKVHGF 113
>AK223448-1|BAD97168.1| 113|Homo sapiens translation factor sui1
homolog protein.
Length = 113
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 77/83 (92%)
Frame = +2
Query: 47 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 226
+H+RIQQRNGRKTLTTVQG++ +YD +K+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKEKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQR 90
Query: 227 ENICQWLTKSGLVKPEQLKVHGF 295
+NICQ+L + G+VK EQLKVHGF
Sbjct: 91 KNICQFLLEVGIVKEEQLKVHGF 113
>AJ012375-1|CAD66615.1| 113|Homo sapiens SUI1 protein protein.
Length = 113
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 76/83 (91%)
Frame = +2
Query: 47 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 226
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQR 90
Query: 227 ENICQWLTKSGLVKPEQLKVHGF 295
+NICQ+L + GL K +QLKVHGF
Sbjct: 91 KNICQFLVEIGLAKDDQLKVHGF 113
>AF083441-1|AAD52028.1| 113|Homo sapiens SUI1 isolog protein.
Length = 113
Score = 145 bits (352), Expect = 1e-34
Identities = 62/83 (74%), Positives = 76/83 (91%)
Frame = +2
Query: 47 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 226
+H+RIQQRNGRKTLTTVQG++ +YD KK+V+A KK+FACNGTV+EHPEYGEV+QLQGDQR
Sbjct: 31 IHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQR 90
Query: 227 ENICQWLTKSGLVKPEQLKVHGF 295
+NICQ+L + GL K +QLKVHGF
Sbjct: 91 KNICQFLVEIGLAKDDQLKVHGF 113
>AF100737-1|AAD19900.1| 113|Homo sapiens putative translation
initiation factor A121/Sui1 protein.
Length = 113
Score = 144 bits (348), Expect = 3e-34
Identities = 62/83 (74%), Positives = 75/83 (90%)
Frame = +2
Query: 47 VHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQR 226
VH+RIQQRNGRKTLTTVQG++ +YD KK+V+ KK+FACNGTV+EHPEYGEV+QLQGDQR
Sbjct: 31 VHIRIQQRNGRKTLTTVQGIADDYDKKKLVKPFKKKFACNGTVIEHPEYGEVIQLQGDQR 90
Query: 227 ENICQWLTKSGLVKPEQLKVHGF 295
+NICQ+L + GL K +QLKVHGF
Sbjct: 91 KNICQFLVEIGLAKDDQLKVHGF 113
>CR533566-1|CAG38597.1| 552|Homo sapiens LOC56926 protein.
Length = 552
Score = 30.3 bits (65), Expect = 5.9
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 11 IKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPE 190
++S D + ++ VR R KTLT + +E + I +K GT + P
Sbjct: 377 LESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNLTEK-----GTPPDMPV 429
Query: 191 YGEVLQLQGDQRENICQWLT 250
+ E +Q+Q +Q +++ WLT
Sbjct: 430 FTEQMQIQQEQLDSVMDWLT 449
>BC019091-1|AAH19091.2| 563|Homo sapiens nicalin homolog
(zebrafish) protein.
Length = 563
Score = 30.3 bits (65), Expect = 5.9
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 11 IKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPE 190
++S D + ++ VR R KTLT + +E + I +K GT + P
Sbjct: 388 LESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNLTEK-----GTPPDMPV 440
Query: 191 YGEVLQLQGDQRENICQWLT 250
+ E +Q+Q +Q +++ WLT
Sbjct: 441 FTEQMQIQQEQLDSVMDWLT 460
>BC013283-1|AAH13283.2| 563|Homo sapiens nicalin homolog
(zebrafish) protein.
Length = 563
Score = 30.3 bits (65), Expect = 5.9
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 11 IKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPE 190
++S D + ++ VR R KTLT + +E + I +K GT + P
Sbjct: 388 LESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNLTEK-----GTPPDMPV 440
Query: 191 YGEVLQLQGDQRENICQWLT 250
+ E +Q+Q +Q +++ WLT
Sbjct: 441 FTEQMQIQQEQLDSVMDWLT 460
>BC010064-1|AAH10064.2| 563|Homo sapiens nicalin homolog
(zebrafish) protein.
Length = 563
Score = 30.3 bits (65), Expect = 5.9
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 11 IKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPE 190
++S D + ++ VR R KTLT + +E + I +K GT + P
Sbjct: 388 LESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNLTEK-----GTPPDMPV 440
Query: 191 YGEVLQLQGDQRENICQWLT 250
+ E +Q+Q +Q +++ WLT
Sbjct: 441 FTEQMQIQQEQLDSVMDWLT 460
>BC008920-1|AAH08920.2| 350|Homo sapiens NCLN protein protein.
Length = 350
Score = 30.3 bits (65), Expect = 5.9
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 11 IKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPE 190
++S D + ++ VR R KTLT + +E + I +K GT + P
Sbjct: 175 LESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNLTEK-----GTPPDMPV 227
Query: 191 YGEVLQLQGDQRENICQWLT 250
+ E +Q+Q +Q +++ WLT
Sbjct: 228 FTEQMQIQQEQLDSVMDWLT 247
>BC007275-1|AAH07275.1| 273|Homo sapiens NCLN protein protein.
Length = 273
Score = 30.3 bits (65), Expect = 5.9
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 11 IKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPE 190
++S D + ++ VR R KTLT + +E + I +K GT + P
Sbjct: 98 LESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNLTEK-----GTPPDMPV 150
Query: 191 YGEVLQLQGDQRENICQWLT 250
+ E +Q+Q +Q +++ WLT
Sbjct: 151 FTEQMQIQQEQLDSVMDWLT 170
>AK172848-1|BAD18812.1| 563|Homo sapiens protein ( Homo sapiens
cDNA FLJ24009 fis, clone KAT07785. ).
Length = 563
Score = 30.3 bits (65), Expect = 5.9
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 11 IKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRACKKEFACNGTVVEHPE 190
++S D + ++ VR R KTLT + +E + I +K GT + P
Sbjct: 388 LESHRDGQRSSIMDVR--SRVDSKTLTRNTRIIAEALTRVIYNLTEK-----GTPPDMPV 440
Query: 191 YGEVLQLQGDQRENICQWLT 250
+ E +Q+Q +Q +++ WLT
Sbjct: 441 FTEQMQIQQEQLDSVMDWLT 460
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,515,012
Number of Sequences: 237096
Number of extensions: 1766127
Number of successful extensions: 4014
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4014
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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