Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3821
(576 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 168 2e-42
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 157 8e-39
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 119 2e-27
06_01_0539 + 3869156-3869908 102 2e-22
06_01_0529 + 3831100-3831852 102 2e-22
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 99 3e-21
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 97 1e-20
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 93 1e-19
06_01_0479 + 3419657-3420337 76 2e-14
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 52 4e-07
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 50 1e-06
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361... 31 0.87
03_02_0472 - 8737955-8738580,8738704-8738767,8739090-8739239,873... 29 2.0
02_05_0902 + 32620668-32621209,32621847-32622258,32622471-326226... 29 2.0
06_02_0303 + 14022428-14022652,14023247-14024159,14024310-140247... 29 3.5
01_06_1116 + 34629592-34630578,34631058-34631686,34632589-34632679 28 4.6
06_01_1080 + 8836289-8836347,8836525-8836783,8836911-8837444,883... 25 7.1
01_01_0450 - 3344203-3344259,3344339-3344506,3344743-3344956,334... 27 8.1
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 168 bits (409), Expect = 2e-42
Identities = 77/126 (61%), Positives = 98/126 (77%)
Frame = +1
Query: 106 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 285
MSSIGTGYDLS + FSPDGRVFQVEYA KAV+NSGTV+G++ KDG+V VEKL+TSK+
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYAGKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMIL 60
Query: 286 PGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASXYRSQYGSPVPLKYLNERVSMYM 465
G+N+R+ + H G+AVAGL +D RQIV A+SEA+ Y YG P+P+K L +RV+ Y+
Sbjct: 61 KGSNRRLHSVHRHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPMPVKELADRVASYV 120
Query: 466 HAYTLY 483
H TLY
Sbjct: 121 HLCTLY 126
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 157 bits (380), Expect = 8e-39
Identities = 78/134 (58%), Positives = 97/134 (72%), Gaps = 8/134 (5%)
Frame = +1
Query: 106 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 285
MSSIGTGYDLS + FSPDGRVFQVEYA KAV+NSGTV+G++ KDG+V VEKL+TSK+
Sbjct: 1 MSSIGTGYDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMML 60
Query: 286 PGANKRIFHIDEHVG--------MAVAGLISDARQIVETARSEASXYRSQYGSPVPLKYL 441
G+N+RI + H G MAVAGL +D RQIV A+SEA+ Y YG P+ +K L
Sbjct: 61 EGSNRRIHSVHWHSGLDIILINVMAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKEL 120
Query: 442 NERVSMYMHAYTLY 483
+RV+ Y+H TLY
Sbjct: 121 ADRVASYVHLCTLY 134
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 119 bits (286), Expect = 2e-27
Identities = 55/111 (49%), Positives = 77/111 (69%)
Frame = +1
Query: 121 TGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANK 300
T YD + FSP+GR+FQVEYA +A++ T IGL+ KDGVV AVEK +TS L EP + +
Sbjct: 19 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVE 78
Query: 301 RIFHIDEHVGMAVAGLISDARQIVETARSEASXYRSQYGSPVPLKYLNERV 453
+I IDEH+G A++GLI+DAR +VE AR E +R YG P+ ++ + +
Sbjct: 79 KIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAI 129
>06_01_0539 + 3869156-3869908
Length = 250
Score = 102 bits (244), Expect = 2e-22
Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 1/150 (0%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KR 303
YD + FSP+GR++QVEYA +A+ N+G+ +G+ DGVV EK +TSKL + + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEK 64
Query: 304 IFHIDEHVGMAVAGLISDARQIVETARSEASXYRSQYGSPVPLKYLNERVSMYMHAYTLY 483
++ ID H+ AVAG++SDA ++ TAR A Y Y P+P++ L + + YT +
Sbjct: 65 MYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQF 124
Query: 484 RRCSAIWGAQSLWAHGQTMKALIMYMLHPS 573
+G L+A +YM PS
Sbjct: 125 GGLRP-FGVSFLFAGWDKHHGFQLYMSDPS 153
>06_01_0529 + 3831100-3831852
Length = 250
Score = 102 bits (244), Expect = 2e-22
Identities = 54/150 (36%), Positives = 85/150 (56%), Gaps = 1/150 (0%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KR 303
YD + FSP+GR++QVEYA +A+ N+G+ +G+ DGVV EK +TSKL + + ++
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEK 64
Query: 304 IFHIDEHVGMAVAGLISDARQIVETARSEASXYRSQYGSPVPLKYLNERVSMYMHAYTLY 483
++ ID H+ AVAG++SDA ++ TAR A Y Y P+P++ L + + YT +
Sbjct: 65 MYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQF 124
Query: 484 RRCSAIWGAQSLWAHGQTMKALIMYMLHPS 573
+G L+A +YM PS
Sbjct: 125 GGLRP-FGVSFLFAGWDKHHGFQLYMSDPS 153
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 98.7 bits (235), Expect = 3e-21
Identities = 50/125 (40%), Positives = 81/125 (64%), Gaps = 6/125 (4%)
Frame = +1
Query: 118 GTGYDLSASQFSPDGRVFQVEYAAKAVENSG-TVIGLRGKDGVVFAVEKLITSKLYEPGA 294
G GYD + FSP+GR++QVEYA KAV+++G T IG+RGKD V +K + KL + +
Sbjct: 6 GAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTS 65
Query: 295 NKRIFHIDEHVGMAVAGLISDARQIVETARSEASXYRSQYGSPVPL----KYLNERVSMY 462
+F I +++G+ GL +DAR +V AR+EA+ +R ++G +P+ K++ ++ +Y
Sbjct: 66 VTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVY 125
Query: 463 -MHAY 474
HAY
Sbjct: 126 TQHAY 130
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 96.7 bits (230), Expect = 1e-20
Identities = 46/117 (39%), Positives = 68/117 (58%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 306
YD + + FSPDG +FQVEYA +AV +G+RG D VV VEK T KL + + ++I
Sbjct: 74 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSMRKI 133
Query: 307 FHIDEHVGMAVAGLISDARQIVETARSEASXYRSQYGSPVPLKYLNERVSMYMHAYT 477
+D H+ +A AGL +DAR ++ AR E +R PV ++Y+ ++ YT
Sbjct: 134 ASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYT 190
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 93.5 bits (222), Expect = 1e-19
Identities = 45/117 (38%), Positives = 67/117 (57%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRI 306
YD + + FSPDG +FQVEYA +AV +G+RG D VV VEK T KL + + ++I
Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSVRKI 63
Query: 307 FHIDEHVGMAVAGLISDARQIVETARSEASXYRSQYGSPVPLKYLNERVSMYMHAYT 477
+D H+ +A AGL +DAR ++ AR E +R V ++Y+ ++ YT
Sbjct: 64 ASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYT 120
>06_01_0479 + 3419657-3420337
Length = 226
Score = 75.8 bits (178), Expect = 2e-14
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Frame = +1
Query: 190 KAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGAN-KRIFHIDEHVGMAVAGLISDARQ 366
+A+ N+G+ +G+ DGVV EK +TSKL + + ++++ ID H+ AVAG++SDA
Sbjct: 2 EAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANI 61
Query: 367 IVETARSEASXYRSQYGSPVPLKYLNERVSMYMHAYTLYRRCSAIWGAQSLWAHGQTMKA 546
++ TAR A Y Y P+P++ L + + YT + +G L+A
Sbjct: 62 LLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRP-FGVSFLFAGWDKHHG 120
Query: 547 LIMYMLHPS 573
+YM PS
Sbjct: 121 FQLYMSDPS 129
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 51.6 bits (118), Expect = 4e-07
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Frame = +1
Query: 127 YDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRG-----------------------KD 237
Y S + FSP G++ Q+E+A AV + T +G++G +
Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKGASREAIPSLYFYCVMRIEKGRGAAN 65
Query: 238 GVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETARSEASXYRSQYG 417
GVV A EK + S L + + ++I + ++G+ +G+ D R +V +R +A Y Y
Sbjct: 66 GVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYK 125
Query: 418 SPVPLKYLNERVSMYMHAYT 477
+P+ L + M +T
Sbjct: 126 ETIPVTQLVRETAAVMQEFT 145
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/89 (29%), Positives = 46/89 (51%)
Frame = +1
Query: 190 KAVENSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQI 369
+AV+ +GLR + V A S+L +++F + +H G+A+AGL +D R +
Sbjct: 2 EAVKQGSACVGLRSRTHAVLAAANKAASEL--SSHQRKVFRVADHAGVALAGLTADGRVL 59
Query: 370 VETARSEASXYRSQYGSPVPLKYLNERVS 456
RSE + Y +P+P+ L R++
Sbjct: 60 SRFLRSECINHAFVYDAPLPVSRLALRLA 88
>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
3611984-3612217,3614113-3614138,3614446-3614633,
3615707-3617670,3617938-3618423,3618527-3618894
Length = 2207
Score = 30.7 bits (66), Expect = 0.87
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 82 KYIKQCVNMSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTV-IGLRGKDGVVFAV 255
+ I C + S G + +F P G ++QV Y+ A ENS T GL + +V +
Sbjct: 1957 RIITACSTVDSKGNDFKALIYEFMPRGDLYQVLYSTCADENSSTSHFGLAQRVSIVMDI 2015
>03_02_0472 -
8737955-8738580,8738704-8738767,8739090-8739239,
8739311-8739422,8739686-8739708
Length = 324
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 382 RSEASXYRSQYGSPVPLKYLNERVSMYMHAYT-LYRRC 492
RS +S S+Y S P +Y ER Y H+ + YRRC
Sbjct: 210 RSYSSYRGSRYRSRSPYRYRRERSCSYDHSVSPYYRRC 247
>02_05_0902 +
32620668-32621209,32621847-32622258,32622471-32622675,
32622712-32622806,32622945-32623557,32623652-32623820,
32624392-32624749,32625226-32625336,32626207-32626561,
32627262-32627484,32627837-32628058,32628628-32628781
Length = 1152
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -2
Query: 254 TANTTPSFPRRPITVPEFSTAFAAYSTWKTRPS 156
+++++ FP P++ PE S+A AA S W + PS
Sbjct: 32 SSSSSSLFPLFPLSAPEESSAPAAGSQWLSNPS 64
>06_02_0303 +
14022428-14022652,14023247-14024159,14024310-14024700,
14024949-14025206,14025284-14025394,14025486-14025564,
14025842-14026027
Length = 720
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 415 GSPVPLKYLNERVSMYMHAYT 477
G P+P++Y NER ++HA T
Sbjct: 123 GKPIPMEYHNERARNWVHART 143
>01_06_1116 + 34629592-34630578,34631058-34631686,34632589-34632679
Length = 568
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 335 AMPTCSSIWNILLFAPGSYN-FDVINFSTANTTPSFPRRPITVPEFSTAFAAYSTW 171
A+P S IW LL A + N FD++ ++ P P S +A+ S W
Sbjct: 396 AIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASNSQW 451
>06_01_1080 +
8836289-8836347,8836525-8836783,8836911-8837444,
8837527-8837636,8843938-8844129,8845062-8845203
Length = 431
Score = 24.6 bits (51), Expect(2) = 7.1
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 374 STICLASDMS-PATAMPTCSSIWNILLFAPGSYNFDVINF 258
S ICL + ++ P T+ P SS + + G YNF V+NF
Sbjct: 99 SLICLLTRVAKPTTSWP--SSEHTVYHYG-GGYNFTVLNF 135
Score = 21.4 bits (43), Expect(2) = 7.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 212 VPEFSTAFAAYSTWKTRPS 156
VP F A + S+W RPS
Sbjct: 172 VPAFDYAVVSASSWFYRPS 190
>01_01_0450 - 3344203-3344259,3344339-3344506,3344743-3344956,
3345039-3345101,3345582-3345769,3345846-3346029,
3346535-3346606,3346676-3346787,3346878-3346953,
3347050-3347100,3347179-3347260,3347331-3347567,
3347650-3347772,3348141-3348326,3348680-3349625,
3350426-3350551,3350683-3350811,3350918-3351049,
3351167-3351301,3351450-3351575,3352080-3352148,
3352149-3352205,3352302-3352436,3352600-3352704,
3352841-3352906,3353333-3353503,3353806-3353983
Length = 1395
Score = 27.5 bits (58), Expect = 8.1
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 106 MSSIGTGYDLSASQFSPDGRVFQVEYAAKAVENSGTVIGLRGKDGVVFAVEKLITSKLYE 285
MSS+ + LS S + ++ + AK VEN+ V GL +D F ++ +T + +
Sbjct: 1147 MSSMSSEQLLSFSYYQEKQKIVRQNEVAKKVENALKVAGLSSRDVTPF-LKVRVTGLISK 1205
Query: 286 PGANK 300
A K
Sbjct: 1206 HSATK 1210
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,089,621
Number of Sequences: 37544
Number of extensions: 332627
Number of successful extensions: 853
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -