Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3819
(644 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0089 + 14359650-14359889,14360859-14361120,14361633-143618... 119 2e-27
07_03_1419 - 26428539-26428778,26429512-26429659,26429896-264300... 111 3e-25
08_01_0448 - 3960134-3960382,3960634-3960694,3961168-3961264,396... 33 0.15
10_07_0024 - 11964126-11964542,11965235-11966176,11966245-119662... 32 0.45
02_03_0369 - 18239123-18239499,18242046-18242445 30 1.8
08_02_1461 - 27299891-27301870 29 2.4
06_01_0870 + 6623478-6624257 29 3.2
01_01_0139 + 1263356-1264273 29 3.2
12_01_0910 + 8858443-8859414 29 4.2
06_01_1021 + 7990313-7990535,7990634-7990708,7991885-7991952 29 4.2
05_02_0028 - 5764980-5766374 29 4.2
01_06_1749 - 39636951-39638102 29 4.2
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 29 4.2
01_01_0144 - 1316626-1316658,1317580-1318863 29 4.2
01_06_1625 + 38729803-38731115,38731202-38731391,38731472-387315... 28 5.5
10_05_0053 + 8602142-8603581 28 7.3
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 28 7.3
07_01_0927 - 7784564-7784656,7785182-7785225,7785946-7785970,778... 28 7.3
06_03_0760 - 24312030-24312425 28 7.3
11_02_0005 - 7264736-7264753,7265086-7265188,7265487-7265539,726... 27 9.7
11_01_0774 - 6464482-6466684,6467214-6467920,6467928-6468152 27 9.7
04_04_1032 - 30259180-30260519,30260650-30260720,30261099-302621... 27 9.7
01_01_0609 + 4527309-4527740,4530776-4531603 27 9.7
>03_03_0089 +
14359650-14359889,14360859-14361120,14361633-14361813,
14362141-14362288,14362836-14363040,14363304-14363362
Length = 364
Score = 119 bits (287), Expect = 2e-27
Identities = 54/103 (52%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Frame = +2
Query: 20 PPIQVNLVNGKEDISVKMSDRGGGIPRSVSELLFKYMYSTAPQPSKSDSHT--VPLAGYG 193
PP+++ + +G ED+++K+SD GGGIPRS +F Y+YSTA P D V +AGYG
Sbjct: 261 PPVRIIVADGAEDVTIKISDEGGGIPRSGLSRIFTYLYSTAENPPDLDGRNEGVTMAGYG 320
Query: 194 YGLPISRLYARYFHGDLVLVSCEGYGTDAVIYLKALTNEANEL 322
YG+PISRLYARYF GDL ++S EGYGTDA ++L L + L
Sbjct: 321 YGIPISRLYARYFGGDLQIISMEGYGTDAYLHLSRLGDSEEPL 363
>07_03_1419 -
26428539-26428778,26429512-26429659,26429896-26430076,
26430285-26430546,26430946-26430975,26431355-26431591
Length = 365
Score = 111 bits (268), Expect = 3e-25
Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 2/93 (2%)
Frame = +2
Query: 20 PPIQVNLVNGKEDISVKMSDRGGGIPRSVSELLFKYMYSTAPQPSKSD--SHTVPLAGYG 193
PP+++ + +G ED+++K+SD GGGIPRS +F Y+YSTA P D S V +AGYG
Sbjct: 270 PPVRIIVADGAEDVTIKVSDEGGGIPRSGLPRIFTYLYSTAKNPPDMDCPSEGVTMAGYG 329
Query: 194 YGLPISRLYARYFHGDLVLVSCEGYGTDAVIYL 292
YGLPISRLYARYF GDL ++S EGYG + +L
Sbjct: 330 YGLPISRLYARYFGGDLQIISMEGYGIPTLHFL 362
>08_01_0448 -
3960134-3960382,3960634-3960694,3961168-3961264,
3963174-3963366
Length = 199
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 574 SRQGGGTYPRGLTIRPTTSKI*IP-ESRRPHFHQPRG 467
S GGG +PRG I P S + P SRRP HQ +G
Sbjct: 23 STSGGGLFPRGQRIWPPASSLSPPLFSRRPRDHQRQG 59
>10_07_0024 -
11964126-11964542,11965235-11966176,11966245-11966291,
11966545-11966602,11968378-11968624,11970207-11970390,
11970410-11970548,11970689-11970796
Length = 713
Score = 31.9 bits (69), Expect = 0.45
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 106 VGASVQVHVQHGAAALQVRLAHGAASGLRI-RAAYLASVRAVFPRRPGAG 252
VG V++HV HG+ + ++H +G I R Y A R + R+ +G
Sbjct: 58 VGLQVEIHVSHGSELAESLVSHSLEAGFSISRVFYEAVTRGLTLRKKDSG 107
>02_03_0369 - 18239123-18239499,18242046-18242445
Length = 258
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +3
Query: 333 SIRRLRSSTAPRPSWRTG----PAPSTPRISAGGRRCLRSHHRYRIAYSPLGWW 482
S+RRL S+TA PS P PS +A G +R +R + PLG W
Sbjct: 17 SLRRLLSATASAPSPAAASPPPPPPSAAAAAAAGADRVRWDYRGQRQLVPLGQW 70
>08_02_1461 - 27299891-27301870
Length = 659
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 589 LLHGRSRQGGGTYPRGLTIRPTTSKI 512
LL GR R GGG + RGL + P S++
Sbjct: 290 LLRGRRRGGGGGHRRGLFVFPLVSRM 315
>06_01_0870 + 6623478-6624257
Length = 259
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 47 GKEDISVKMSDRGGG--IPRSVSELLFKYMYSTAPQPSKSDSHTVPLAGYGYGLPISRLY 220
GK + V + D GGG P + S ++ +Y+ PQ + +P +R +
Sbjct: 66 GKVPVLVVVDDDGGGGGCPLAESLVILEYVDEVWPQAPR----LLPPPSSPRARAAARFW 121
Query: 221 ARYFHGDL 244
AR+FHG++
Sbjct: 122 ARFFHGEV 129
>01_01_0139 + 1263356-1264273
Length = 305
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 327 RSSIRRLRSSTAPRPSWRTGPAPSTPRISAGGR-RCLRSHHRYRIAYSP 470
R S RR RSS R + +P+TP + R R R+H R A SP
Sbjct: 107 RPSSRRPRSSAPTRRTAAGATSPTTPSTTTSARARTRRAHARSPAAASP 155
>12_01_0910 + 8858443-8859414
Length = 323
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = +3
Query: 351 SSTAPRPSWRTGPAPST---PRISAGG----RRCLRSHHRYRIAYSPL 473
+S P P WR P+P+ P + AG RR + +H R+ +A S L
Sbjct: 12 ASPLPLPPWRPDPSPAVLPWPDLLAGAAAATRRLIAAHSRHFLALSSL 59
>06_01_1021 + 7990313-7990535,7990634-7990708,7991885-7991952
Length = 121
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 82 RRRHPAQRV----GASVQVHVQHGAAALQVRLAHGAASGLRIRAAYLASVRAVFPRRPGA 249
RRR A RV G S H + AAA R A+ ++++A LA + FP+ PG
Sbjct: 11 RRRGSAARVASPSGGSPSPHGEELAAAATER--DNLATSVKVQARVLALSPSGFPKPPGP 68
Query: 250 GI 255
G+
Sbjct: 69 GL 70
>05_02_0028 - 5764980-5766374
Length = 464
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 333 SIRRLRSSTAPRPSWRTG 386
S RRLR++T PR SWR G
Sbjct: 39 SRRRLRTNTLPRRSWRRG 56
>01_06_1749 - 39636951-39638102
Length = 383
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 638 SSIVTTAAPPFKPKRITA 585
SS+ + AAPPF P RIT+
Sbjct: 164 SSVASAAAPPFDPSRITS 181
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -1
Query: 431 TPSPSCTDSRS*GCRTSPPAGTRGGRTSKTSY*RPAVAR 315
+P P+C D RS G R AG RGGR + Y R V R
Sbjct: 27 SPPPACADERSNGMR----AGGRGGR--RVEYGRTYVVR 59
>01_01_0144 - 1316626-1316658,1317580-1318863
Length = 438
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 390 APSTPR-ISAGGRRCLRSHHRYRIAYSPLGWWKCGRRDSGIQILLVVG 530
+P PR + R C+ +H + R +SP G GR I+ L ++G
Sbjct: 240 SPQGPRLVFVPLRHCIDAHDKPRHCFSPDGHRSIGRVSGAIKFLALIG 287
>01_06_1625 +
38729803-38731115,38731202-38731391,38731472-38731504,
38731582-38732199,38732304-38733011
Length = 953
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 351 SSTAPRPSWRTGPAPSTPRISAGGRRCLR 437
SS++PR G P TP + RRCLR
Sbjct: 252 SSSSPRTPPYGGATPKTPNLEGLKRRCLR 280
>10_05_0053 + 8602142-8603581
Length = 479
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 394 GAGPVRQLGRGAVELRRRLIEDRQ*LVGFVR*SLEVDDGVR-AVTLARYQHQVA 236
G G +G GAVE + D L+ F SLE DD VR A T R++ VA
Sbjct: 41 GGGGGGGVGGGAVEDDGCPLHDEVLLLVFAECSLETDDLVRCAATCRRWRRLVA 94
>08_01_0321 +
2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 112 ASVQVHVQHGAAALQVRLAHGAASGLRIRAAYLASVRAVFPRR 240
A ++ H +G AL+V LAH +G+ YLA V R
Sbjct: 506 ACLRAHGAYGGRALEVLLAHHVVTGMPADMNYLADTGWVVTTR 548
>07_01_0927 -
7784564-7784656,7785182-7785225,7785946-7785970,
7786357-7786497,7786590-7786619,7786686-7786762,
7786816-7786855,7787055-7787122,7787782-7789864
Length = 866
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 595 ALLLHGRSRQGGGTYPRGLTIRPTTSKI*IPESRRPHFHQPRGL 464
ALLL GR+ +GG R T+ + + RR FH RG+
Sbjct: 24 ALLLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGV 67
>06_03_0760 - 24312030-24312425
Length = 131
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 418 PALIRGVEGAGPVRQLGRGAVELRRRLIEDRQ*LVGFVR*SLEVDDGVR 272
PA IRG G G R G G ++RRR E Q G++ E ++ R
Sbjct: 69 PARIRGGRGGGWRRSAGEGDGDIRRRTGEAAQAAGGWLAPRKEKEEAGR 117
>11_02_0005 -
7264736-7264753,7265086-7265188,7265487-7265539,
7265791-7265880,7266093-7266217,7266528-7266753
Length = 204
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +2
Query: 14 APPPIQVNLVNGKEDISVKMSDRGGGIPRSVSELLFKYMYSTAPQPSKSDSHTVPLAGYG 193
+PPP+ D+ + S+ G +P+ + + F+ + P K A
Sbjct: 50 SPPPLPTAPAPTHADLFARRSNSEGQVPKKTTSMGFERWWLPPPPEVKKPRSLYNAASLA 109
Query: 194 Y-GLPISRLYAR 226
Y G I LYAR
Sbjct: 110 YLGDCIYELYAR 121
>11_01_0774 - 6464482-6466684,6467214-6467920,6467928-6468152
Length = 1044
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 130 VQHGAAALQVRLAHGAASGLRIRAAYLAS-VRAVFPR 237
V+HGAAA ++ S L++ AA L+ ++A+ PR
Sbjct: 55 VEHGAAAAAAAVSPSNRSLLKMEAALLSGFIKAILPR 91
>04_04_1032 -
30259180-30260519,30260650-30260720,30261099-30262118,
30263886-30264121
Length = 888
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 345 LRSSTAPRPSWRTGPAPSTPRI 410
L ST+ P+WRTG + PRI
Sbjct: 719 LEHSTSASPAWRTGRRTAMPRI 740
>01_01_0609 + 4527309-4527740,4530776-4531603
Length = 419
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 153 EGCGAVLYMYLNRSSDTLRGMPPPRSDILTDMSSFP 46
+G GA ++N D RG+P PR + D FP
Sbjct: 165 DGMGAA--QFINAVGDMARGLPEPRVKPVWDREKFP 198
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,104,811
Number of Sequences: 37544
Number of extensions: 442841
Number of successful extensions: 1790
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1788
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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