Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3790
         (556 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126248-1|AAI26249.1|  254|Homo sapiens outer dense fiber of sp...    33   0.67 
BC126222-1|AAI26223.1|  254|Homo sapiens outer dense fiber of sp...    33   0.67 
AY713299-1|AAW83203.1|  254|Homo sapiens TISP50 protein.               33   0.67 
AB067774-1|BAB70734.1|  254|Homo sapiens h-SHIPPO 1 protein.           33   0.67 

>BC126248-1|AAI26249.1|  254|Homo sapiens outer dense fiber of sperm
           tails 3 protein.
          Length = 254

 Score = 33.1 bits (72), Expect = 0.67
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = -1

Query: 547 YRANWVPGPPSSFFFIAHSPPGVKWLLEPTDIYDVNAPPTLRYKF*GLKYSYNGCPTLQT 368
           +   W P  P       +S PG K+L+ PT  +  + P  LR       YS+ G P L  
Sbjct: 6   WMGTWRPHRPRGPIMALYSSPGPKYLIPPTTGFMKHTPTKLR----APAYSFRGAPMLLA 61

Query: 367 E 365
           E
Sbjct: 62  E 62


>BC126222-1|AAI26223.1|  254|Homo sapiens outer dense fiber of sperm
           tails 3 protein.
          Length = 254

 Score = 33.1 bits (72), Expect = 0.67
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = -1

Query: 547 YRANWVPGPPSSFFFIAHSPPGVKWLLEPTDIYDVNAPPTLRYKF*GLKYSYNGCPTLQT 368
           +   W P  P       +S PG K+L+ PT  +  + P  LR       YS+ G P L  
Sbjct: 6   WMGTWRPHRPRGPIMALYSSPGPKYLIPPTTGFMKHTPTKLR----APAYSFRGAPMLLA 61

Query: 367 E 365
           E
Sbjct: 62  E 62


>AY713299-1|AAW83203.1|  254|Homo sapiens TISP50 protein.
          Length = 254

 Score = 33.1 bits (72), Expect = 0.67
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = -1

Query: 547 YRANWVPGPPSSFFFIAHSPPGVKWLLEPTDIYDVNAPPTLRYKF*GLKYSYNGCPTLQT 368
           +   W P  P       +S PG K+L+ PT  +  + P  LR       YS+ G P L  
Sbjct: 6   WMGTWRPHRPRGPIMALYSSPGPKYLIPPTTGFMKHTPTKLR----APAYSFRGAPMLLA 61

Query: 367 E 365
           E
Sbjct: 62  E 62


>AB067774-1|BAB70734.1|  254|Homo sapiens h-SHIPPO 1 protein.
          Length = 254

 Score = 33.1 bits (72), Expect = 0.67
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = -1

Query: 547 YRANWVPGPPSSFFFIAHSPPGVKWLLEPTDIYDVNAPPTLRYKF*GLKYSYNGCPTLQT 368
           +   W P  P       +S PG K+L+ PT  +  + P  LR       YS+ G P L  
Sbjct: 6   WMGTWRPHRPRGPIMALYSSPGPKYLIPPTTGFMKHTPTKLR----APAYSFRGAPMLLA 61

Query: 367 E 365
           E
Sbjct: 62  E 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,356,447
Number of Sequences: 237096
Number of extensions: 1994293
Number of successful extensions: 3203
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3203
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)