BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3787
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK094992-1|BAC04469.1| 145|Homo sapiens protein ( Homo sapiens ... 30 8.9
AK091518-1|BAC03683.1| 120|Homo sapiens protein ( Homo sapiens ... 30 8.9
>AK094992-1|BAC04469.1| 145|Homo sapiens protein ( Homo sapiens
cDNA FLJ37673 fis, clone BRHIP2012141. ).
Length = 145
Score = 29.9 bits (64), Expect = 8.9
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 88 NQQNYNLRNHWW*DLLGVHTG-RYHRPP 8
NQ Y+ N W DL+ H+G RY RPP
Sbjct: 45 NQNEYHSGNLGWSDLIFSHSGHRYFRPP 72
>AK091518-1|BAC03683.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ34199 fis, clone FCBBF3019570. ).
Length = 120
Score = 29.9 bits (64), Expect = 8.9
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 460 FDLYLASTHLKSFGMSDSPPIKL*RSLYI 546
F+L L ++HLKS+G+ + PP+ +S I
Sbjct: 61 FELSLRTSHLKSYGLLEDPPLSKGKSRLI 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,332,537
Number of Sequences: 237096
Number of extensions: 2290265
Number of successful extensions: 7439
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7439
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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