Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3774
         (621 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81086-3|CAD56586.1|  711|Caenorhabditis elegans Hypothetical pr...    44   7e-05
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr...    44   7e-05
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    31   0.88 
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    31   0.88 
Z82282-6|CAB05273.1|  147|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z81086-3|CAD56586.1|  711|Caenorhabditis elegans Hypothetical
           protein F53B6.2b protein.
          Length = 711

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -3

Query: 220 QELIIQCVRDEDGKNASPYMCDPHTKPENRVRTCNDHPCPP 98
           Q+  ++C++   GK+     CD   +P  + R CN HPCPP
Sbjct: 137 QKAALKCIQVSTGKSVQWSQCDARRRPPEKSRPCNQHPCPP 177


>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
           protein F53B6.2a protein.
          Length = 1045

 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -3

Query: 220 QELIIQCVRDEDGKNASPYMCDPHTKPENRVRTCNDHPCPP 98
           Q+  ++C++   GK+     CD   +P  + R CN HPCPP
Sbjct: 471 QKAALKCIQVSTGKSVQWSQCDARRRPPEKSRPCNQHPCPP 511


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 208  IQCVRDEDGKNASPYMCDPHTKPENRVRTCNDHPCP-PRLV 89
            + C R  +G     Y CD +T+P  + +TC    C  PR++
Sbjct: 1320 VSCTRGSEGTIVDEYFCDRNTRPRLK-KTCEKDTCDGPRVL 1359


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 208  IQCVRDEDGKNASPYMCDPHTKPENRVRTCNDHPCP-PRLV 89
            + C R  +G     Y CD +T+P  + +TC    C  PR++
Sbjct: 1320 VSCTRGSEGTIVDEYFCDRNTRPRLK-KTCEKDTCDGPRVL 1359


>Z82282-6|CAB05273.1|  147|Caenorhabditis elegans Hypothetical
           protein T07G12.8 protein.
          Length = 147

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 121 CNDHPCPPRLVAIILNIFILFFY 53
           C D P P R++    + FILFFY
Sbjct: 40  CIDKPVPIRIIFYFFSNFILFFY 62


>U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical
           protein D1044.7 protein.
          Length = 400

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -3

Query: 412 LNKNNNFVFPLMCPPSDGFLLFVLSLFY 329
           L  NNNF  PL C P D    F +S  Y
Sbjct: 26  LTSNNNFNQPLTCTPQDPCSCFSVSARY 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,978,908
Number of Sequences: 27780
Number of extensions: 322447
Number of successful extensions: 773
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)