Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3762
(726 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 27 0.24
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 27 0.24
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 27 0.24
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 26 0.31
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 26 0.42
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 26 0.42
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 26 0.42
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 0.73
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.0
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 26.6 bits (56), Expect = 0.24
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 361 IGRFPPMLFITK-RKTPTVVERTDKGTISTST 269
+G PP + ++ K+PTV+E GT++ ST
Sbjct: 628 LGLEPPRVILSSGAKSPTVLEELTHGTLAAST 659
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 26.6 bits (56), Expect = 0.24
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 361 IGRFPPMLFITK-RKTPTVVERTDKGTISTST 269
+G PP + ++ K+PTV+E GT++ ST
Sbjct: 628 LGLEPPRVILSSGAKSPTVLEELTHGTLAAST 659
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 26.6 bits (56), Expect = 0.24
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 361 IGRFPPMLFITK-RKTPTVVERTDKGTISTST 269
+G PP + ++ K+PTV+E GT++ ST
Sbjct: 628 LGLEPPRVILSSGAKSPTVLEELTHGTLAAST 659
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 26.2 bits (55), Expect = 0.31
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 333 MNNIGGNLPILVDPVSKAIGYREAIMIFYAGFYGISSILFFLTMFLM 473
M +GG + P+ K IGY A+M + Y I + + + F M
Sbjct: 44 MLTVGGLGVFKIAPLFKGIGYAAAVMSCWMNVYYIVILAWAIFYFFM 90
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 25.8 bits (54), Expect = 0.42
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +3
Query: 183 SVVFGPLWAMITLAFAYFFAEMWFGIVFAVLVEIVPLSVRSTTVGVFLFVMNNIGGNLPI 362
++ G LW L + A+ + VP+ + ++G M IGG
Sbjct: 36 AIGLGNLWRFPYLCYKNGGGAFMVPYFIALALAGVPMFLMELSLGQ----MMTIGGLGVF 91
Query: 363 LVDPVSKAIGYREAIMIFYAGFYGISSI---LFFLTMFL 470
+ P+ K IGY ++ + Y I + LF+L + L
Sbjct: 92 KIAPIFKGIGYATCVLSCWTNIYYIIILAWALFYLLVSL 130
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 25.8 bits (54), Expect = 0.42
Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +3
Query: 183 SVVFGPLWAMITLAFAYFFAEMWFGIVFAVLVEIVPLSVRSTTVGVFLFVMNNIGGNLPI 362
++ G LW L + A+ + VP+ + ++G M IGG
Sbjct: 89 AIGLGNLWRFPYLCYKNGGGAFMVPYFIALALAGVPMFLMELSLGQ----MMTIGGLGVF 144
Query: 363 LVDPVSKAIGYREAIMIFYAGFYGISSI---LFFLTMFL 470
+ P+ K IGY ++ + Y I + LF+L + L
Sbjct: 145 KIAPIFKGIGYATCVLSCWTNIYYIIILAWALFYLLVSL 183
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 25.8 bits (54), Expect = 0.42
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 524 VQSCGCRCFFLFLNRSVHQEHCQEEQDAADAIKSGIE 414
V SC C + ++ HC E+ +AA +K IE
Sbjct: 1708 VVSCASGCTAVETKSKPYKFHCMEKNEAAMKLKKRIE 1744
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 25.0 bits (52), Expect = 0.73
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 102 YVAKMGIRSRVLVLALSQLIATLPSFGSVVFGPLWAMITLA 224
++ + + ++ LA+ AT F +FG LW I LA
Sbjct: 103 FIVSLAVADLMVGLAVLPFSATWEVFKVWIFGDLWCSIWLA 143
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 464 HCQEEQDAADA 432
HCQ EQDA +A
Sbjct: 1172 HCQTEQDAPEA 1182
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 535 TATTSSGKREHYLTH 579
T+TT+S +EH L H
Sbjct: 635 TSTTTSPDKEHVLAH 649
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 373 PFPRPSVIEKPS*FSMPDFM 432
PF P I P+ MP FM
Sbjct: 1131 PFTSPGGIPGPNGIKMPSFM 1150
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,874
Number of Sequences: 438
Number of extensions: 5130
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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