Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3749
(692 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 31 0.16
SPBC3B8.02 |php5||CCAAT-binding factor complex subunit Php5|Schi... 30 0.36
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.84
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 28 1.5
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 28 1.5
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 1.5
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 1.9
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 27 2.6
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 26 5.9
SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch... 26 5.9
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 26 5.9
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 25 7.9
SPBP8B7.13 |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.9
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 7.9
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 7.9
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 31.1 bits (67), Expect = 0.16
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 334 GTSTPRVSSAPSGPMNSEYSIQYHPYEQYEQMYKTEDPYVHYPEQPKTEYDTGGSYFS 507
G PR+ + P+++++ + +E+ E + E V YP + TE +T Y S
Sbjct: 410 GNVKPRIHAGTGSPVSTQHWGELEEFEEEESSEEEESEDVEYPTEEITERETIEEYQS 467
>SPBC3B8.02 |php5||CCAAT-binding factor complex subunit
Php5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 29.9 bits (64), Expect = 0.36
Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 4/130 (3%)
Frame = +1
Query: 55 PLPTPDASPVENEKEN---FQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAPVAAMGMA 225
P+PT P N++ + QY + D S YK R GS P +
Sbjct: 231 PMPTGSQLPFSNQQSSQPSMQYSSHPSRMQQMQDIDQ-SMYKQQRLGSEYPQLQMSDNSG 289
Query: 226 NGMYVMCTQRTLTEQPPLVTGTF-FPPVATSQDQQALGTSTPRVSSAPSGPMNSEYSIQY 402
N + M QR + P + + +PP G+S R+ S+P G ++
Sbjct: 290 N-VNQMNMQRPVMVAPYMAEHLYRYPPTHLES-----GSSAFRLQSSPMGYQMPQFQGNM 343
Query: 403 HPYEQYEQMY 432
P Q QM+
Sbjct: 344 RPNMQQSQMF 353
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 193 SPAPVAAMGMANGMYVMCTQRTLTEQP-PLVTGTFFP 300
S VAAMG NG+ TQ L Q P+ TG+ P
Sbjct: 203 SATQVAAMGGMNGLQPFPTQAGLPNQGFPMPTGSQLP 239
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 0.84
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 350 ACLRRPAAP*TLNTASNTIPT-NNTNRCTKLKTPTCTTRSSLKPNTTPAVA 499
+C + P T N+ + PT T+ T L T CTT +S+ +TP +
Sbjct: 392 SCTTSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTS 442
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 365 PAAP*TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTTPAV 496
P + + +T SN +PT +T+ T P SSL TP V
Sbjct: 152 PTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTV 195
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 615 NTSTTAQRVPWINTSSTDTSNNAI 686
+TS+T+ +P +TSSTDT++N +
Sbjct: 142 STSSTSIPIPPTSTSSTDTNSNPL 165
Score = 26.2 bits (55), Expect = 4.5
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 389 TASNTIPTNNTN-RCTKLKTPTCTTRSSLKPNTTPAVA 499
T S ++P +T T L T CTT +S+ +TP +
Sbjct: 451 TTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYTSTPVTS 488
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 389 TASNTIPTNNTN-RCTKLKTPTCTTRSSLKPNTTPAVA 499
T S +IP +T T L T CTT +S+ +TP +
Sbjct: 474 TTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTS 511
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 389 TASNTIPTNNTN-RCTKLKTPTCTTRSSLKPNTTPAVA 499
T S ++P +T T L T CTT +S+ +TP +
Sbjct: 428 TTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTS 465
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 365 PAAP*TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTTPAVA 499
P T+++ + T+ T L T CTT +S+ +TP +
Sbjct: 526 PVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTS 570
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +1
Query: 304 VATSQDQQALGTSTPRVSSAPSGPMNSEYSIQYHPYEQYEQMYKTEDPYVHYPEQPKTEY 483
V+ S G+STP +S+ S N + Y++Y + + + Y HY Q Y
Sbjct: 269 VSASNSPALSGSSTPSNTSSRSNRQNHGNFSEKRHYDRYGNSHPSYNKYSHY--QHGFNY 326
Query: 484 DTGGS 498
+ G+
Sbjct: 327 NNSGN 331
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 27.9 bits (59), Expect = 1.5
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 5/81 (6%)
Frame = +1
Query: 244 CTQRTLTEQPPLVTGTFFPPVATSQD-QQALGTSTPRVSSAPSGPMNSEYSIQYHPYEQY 420
C R LT PP PP + +TP S++ + P + + Q Y
Sbjct: 40 CPVRGLTIPPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAA 99
Query: 421 EQMYKTEDPY----VHYPEQP 471
Q Y + Y +YP QP
Sbjct: 100 PQPYPPQGGYPQQPYYYPNQP 120
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 331 LGTSTPRVSSAPSGPMNSEYSIQYHPYEQYEQMYKTEDPYVHYPEQ 468
+G S +SAPS M S+ ++ PY+ Y + DP + P+Q
Sbjct: 551 MGPSAHDSASAPSPHMQSQQAL---PYQYYNPLPAMADPAQNVPQQ 593
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 380 TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTTP 490
TL TA+ + PT +NR + KT T K TTP
Sbjct: 287 TLRTANGSEPTKKSNRSEQSKT-VANTNVGSKNGTTP 322
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 279 SDRNILPASSHISRSTSFGHVNPTRVFGAQRPHEL 383
S N+ S R +F VNP R+ ++RP+EL
Sbjct: 70 SFNNVSSPSLEDERLINFPRVNPNRLMTSKRPNEL 104
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 25.8 bits (54), Expect = 5.9
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 40 TPAEAPLPT-PDAS--PVENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPA-PV 207
T APLP+ P+ V NEK N ++ R L P +S + R ++PA P
Sbjct: 592 TGGYAPLPSRPNRMNHSVLNEKSNKEFVRGPRVLPPIEVSSSKMAGLDIRKEPFTPAVPS 651
Query: 208 AAMGM 222
A G+
Sbjct: 652 AKSGL 656
>SPAC29B12.10c |||OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 352 VSSAPSGPMNSEYSIQYHPYEQYEQMY 432
VS S +NS+YS + YE Y +Y
Sbjct: 449 VSYNSSRVLNSDYSFNHTKYESYSPLY 475
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +1
Query: 58 LPTPDASPVENEKENFQYEERRRTLNPSSISDTYSPYKSY 177
L P + P E + E + + SS S TYS +SY
Sbjct: 605 LTMPKSEPKEQDSEGYSSGSETGSTYSSSYSSTYSRGRSY 644
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 349 RVSSAPSGP-MNSEYSIQYHPYEQYEQMYKTEDPYVHYPEQPKT 477
+ S+AP+ +N ++S +Y P+ QY+ P V+ P T
Sbjct: 224 QASTAPNPQEINYQWSHEYRPHTQYQNNLLRAQPNVNCENFPTT 267
>SPBP8B7.13 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 25.4 bits (53), Expect = 7.9
Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 1/114 (0%)
Frame = +1
Query: 70 DASPVENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAPVAAMGMANGM-YVMC 246
D P + E ENF YE L P++ + +SP S P+ + N + Y
Sbjct: 71 DQDPNDEESENFVYE----NLIPTNDDELHSPSASIHSFQTYNLPLEMLPTINHVPYYGS 126
Query: 247 TQRTLTEQPPLVTGTFFPPVATSQDQQALGTSTPRVSSAPSGPMNSEYSIQYHP 408
PL P +++ +G+S R +S + + +Q +P
Sbjct: 127 AGTNALNGGPLSNSRKLIPKRSAKFSSMVGSSDTRCNSPTTARGLATSPLQINP 180
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 522 ESSTGGRIHESSFRNK 569
+++TGGR+ SSFR+K
Sbjct: 479 DAATGGRVSSSSFRDK 494
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 609 SINTSTTAQRVPWINTSSTDTSNNAIGR 692
S+ + T+ VPW N++ +TSN R
Sbjct: 3868 SVYYNATSSTVPWSNSTFRNTSNTMTSR 3895
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.129 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,803,301
Number of Sequences: 5004
Number of extensions: 58928
Number of successful extensions: 193
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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