Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3749
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0554 + 29929860-29929959,29932944-29934220 35 0.070
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 33 0.16
05_05_0093 + 22336593-22337198,22338123-22339076 32 0.50
05_01_0164 + 1134815-1134911,1135078-1135278,1135875-1136156,113... 31 0.66
01_06_1723 - 39443176-39443505,39443615-39443710,39443834-394439... 31 0.87
05_03_0424 - 13795721-13795900,13796134-13796202,13796260-137963... 30 2.0
07_01_0251 + 1874148-1874311,1874367-1874429,1874484-1874709,187... 29 2.6
07_03_1116 - 24084162-24084201,24084481-24084570,24084640-240852... 29 3.5
06_01_1159 - 9852316-9852441,9852743-9852838,9852912-9852977,985... 29 3.5
12_01_0370 - 2835071-2835285,2835427-2836045 29 4.6
09_06_0016 - 20240358-20240797,20241040-20241131,20241132-202412... 29 4.6
06_03_0828 + 25137782-25138312,25141349-25141588 29 4.6
02_02_0219 + 7985152-7985575,7985818-7985894,7986067-7986127,798... 29 4.6
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 29 4.6
08_01_0264 - 2142856-2143152,2143667-2143829,2143915-2143992,214... 28 6.1
04_01_0611 - 8029101-8029205,8029985-8030107,8030191-8030556,803... 28 6.1
12_02_1283 - 27532143-27532517,27532602-27532906,27533053-275333... 28 8.1
09_06_0081 + 20745627-20748144,20748211-20748308 28 8.1
06_01_0868 - 6606913-6607000,6607516-6608010,6610313-6610761,661... 28 8.1
04_03_0630 - 18182681-18182931,18183397-18183463,18184899-181849... 28 8.1
03_06_0648 + 35280492-35280645,35281742-35281820,35282491-352825... 28 8.1
03_02_0472 - 8737955-8738580,8738704-8738767,8739090-8739239,873... 28 8.1
03_01_0178 + 1437263-1438017,1438754-1438858,1438950-1439072,143... 28 8.1
02_05_0202 + 26708049-26709074 28 8.1
>02_05_0554 + 29929860-29929959,29932944-29934220
Length = 458
Score = 34.7 bits (76), Expect = 0.070
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 136 PSSISDTYSPYKSYRPGSYSPAPVAAMGMANGMY-VMCTQRTLTEQPPLVTGTFFPPVAT 312
PSS S Y SY PG YS P+ + + + +Y + + T+ P V+ + + + T
Sbjct: 278 PSSSSSGYLSLGSYNPGQYSYTPMVSSSLDDSLYFIKLSGMTVAGNPLSVSSSAYSSLPT 337
Query: 313 SQDQQALGTSTP 348
D + T P
Sbjct: 338 IIDSGTVITRLP 349
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 33.5 bits (73), Expect = 0.16
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 2/130 (1%)
Frame = +1
Query: 37 STPAEAPLPT-PDASPVENEKENFQYEERRRTLNPSSISDTYSPYK-SYRPGSYSPAPVA 210
++P+ + PT P SP ++ Y + +P+S S YSP SY P S S +P +
Sbjct: 1700 TSPSYSYSPTSPSYSPTS---PSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSYSPTS 1756
Query: 211 AMGMANGMYVMCTQRTLTEQPPLVTGTFFPPVATSQDQQALGTSTPRVSSAPSGPMNSEY 390
T + + T + + P + + + G S S +PS P +
Sbjct: 1757 PSYSPTSPSYSPTSPSYSP-----TSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPS 1811
Query: 391 SIQYHPYEQY 420
S++Y P Y
Sbjct: 1812 SVKYTPSHAY 1821
>05_05_0093 + 22336593-22337198,22338123-22339076
Length = 519
Score = 31.9 bits (69), Expect = 0.50
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 193 SPAPVAAMGMANGMYVMCTQRTLTEQPPLVT 285
+P P AA G A+G+ +CT RTL + L T
Sbjct: 293 APPPAAASGPASGVLFVCTHRTLMDPVVLAT 323
>05_01_0164 +
1134815-1134911,1135078-1135278,1135875-1136156,
1136237-1136271,1136356-1136445,1137228-1137357,
1137400-1138004,1138128-1138562
Length = 624
Score = 31.5 bits (68), Expect = 0.66
Identities = 26/80 (32%), Positives = 35/80 (43%)
Frame = +3
Query: 441 RPLRALPGAA*NRIRHRR*LFLGRTSAESSTGGRIHESSFRNKDGFSRLRRRHQGSSINT 620
+P RALP A R + G SSTGG+ + S + R+ G S+N
Sbjct: 248 KPPRALPRVATMRAPTNTAVASGIPDKRSSTGGKTNMYSLVG----GVVNRQTVGKSVNN 303
Query: 621 STTAQRVPWINTSSTDTSNN 680
S +A P T ST TS +
Sbjct: 304 SVSAHSRPGGVTKSTSTSKS 323
>01_06_1723 -
39443176-39443505,39443615-39443710,39443834-39443902,
39444381-39444443,39444521-39444598,39444725-39444838,
39445727-39445804,39446457-39446522,39446739-39446804,
39446896-39447003,39447355-39447432,39447951-39448010,
39448087-39448191,39448407-39448595,39448922-39448985,
39449244-39449385,39449494-39449654,39449952-39450076,
39450230-39450300,39450410-39450560,39450713-39450769,
39451049-39451143,39451331-39451379
Length = 804
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 274 PLVTGTFFPPVATSQDQQALGTSTPRVSSAPS 369
P V T PPVATS +TP VS+ PS
Sbjct: 719 PAVAPTVAPPVATSSAHHIAPVTTPTVSTTPS 750
>05_03_0424 -
13795721-13795900,13796134-13796202,13796260-13796385,
13797224-13798166,13798263-13799248
Length = 767
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 249 TEDADGAAASSDRNILPASSHISRSTSFGHVNPTRVFGAQRPH 377
+ + AAA+SD +L +SH S T+F + R F + RPH
Sbjct: 93 SSSSSAAAAASDYALLLLASH-SAPTAFSYNVAIRFFASSRPH 134
>07_01_0251 + 1874148-1874311,1874367-1874429,1874484-1874709,
1874830-1875081,1875158-1875267,1875720-1875815,
1875898-1875985,1876246-1876475,1876745-1876929,
1877136-1877335,1877592-1877924,1878058-1878159,
1878869-1879166,1879626-1879774,1879859-1880143,
1880531-1880728
Length = 992
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 278 RGGCSVSVLCVHMTYMPLAMPIAATGAGE*EPGLYDLYGEYVSDIDEGFKVLRLSSYWKF 99
RGG + +CV + + L+ P+ + G LY + DE F LR+++Y F
Sbjct: 851 RGGAIIYYVCVFLYFWVLSTPVVSLVFGS---YLYICINWFHIHFDEAFSSLRIANYKAF 907
Query: 98 S 96
+
Sbjct: 908 T 908
>07_03_1116 -
24084162-24084201,24084481-24084570,24084640-24085220,
24085653-24085822,24086006-24087074
Length = 649
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = +1
Query: 55 PLPTPDASPVENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAPVA 210
P P P + + Y T +P + + PY + +P Y+P VA
Sbjct: 504 PPPMPSYPDRYGHADRYHYTAPSATYDPPAYASYSEPYSASKPYQYTPGSVA 555
>06_01_1159 -
9852316-9852441,9852743-9852838,9852912-9852977,
9853091-9853180,9853262-9853373,9853515-9853598,
9853864-9853940,9854823-9854873,9854924-9855031,
9855703-9855774,9856952-9857011,9857808-9857876,
9858005-9858088,9858212-9858295,9859106-9859198,
9859930-9860030,9861155-9861264,9863058-9863104,
9863693-9863778,9863940-9864012,9864454-9864540,
9864650-9865301,9866164-9867182,9867702-9867797
Length = 1180
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 37 STPAEAPLPTPDASPVENEKENFQYEERRRTLNPSSISDTYSPYK--SYRPGSYSPAPVA 210
ST + + ++ K EE + ++ S + S K S R S A +
Sbjct: 205 STKKQRKSVKTSTAATKSRKIGVNQEESKSDISKSKKAADSSKEKKTSSRSKKSSKAKES 264
Query: 211 AMGMANGMYVMCTQRTLTEQPPLVTGTFFPPVATS 315
A A +CT +++EQ PLV +PP A S
Sbjct: 265 AASNATAKAEICTMTSVSEQKPLV--PLYPPTAKS 297
>12_01_0370 - 2835071-2835285,2835427-2836045
Length = 277
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = +1
Query: 205 VAAMGMANGMYVMCTQR--TLTEQPPLVTGTFFPPVATSQDQQALGTSTPRVSSAPSGPM 378
V +G A+ +++ C +R + PP V T PP +QQ S + P
Sbjct: 125 VRGLGAADRLFIGCRRRGESAPAPPPAVRVTPQPPALNGGEQQPWSPMCYSTSGSSYDPT 184
Query: 379 NSEYSIQYH 405
+ S YH
Sbjct: 185 SPANSYAYH 193
>09_06_0016 -
20240358-20240797,20241040-20241131,20241132-20241250,
20241398-20241561,20241664-20241757,20242048-20242080,
20242361-20242478,20242712-20242812,20242882-20242962,
20243138-20243335,20243411-20243545,20243662-20243667,
20243727-20243805,20243845-20243896,20244328-20244388,
20244475-20244532,20245137-20245225,20246305-20246799
Length = 804
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 216 GHGQRHVRHVHTEDADGAAASSDRNIL 296
GH + HV H+H +D AAA++ +++
Sbjct: 716 GHRRHHVLHIHDDDDPVAAAAAAEHVI 742
>06_03_0828 + 25137782-25138312,25141349-25141588
Length = 256
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +3
Query: 177 QARLLLASPRGRNGHGQRHVRHVHTEDADGAAASSDRNILPASSHISRSTSFGHVNPTR 353
Q R L GR G+ R H E+ G AAS + + S +RS + H P R
Sbjct: 73 QIRARLGEGEGRRRRGRGAARRSHAEERRGGAASRE-IAMRRSGVAARSAASTHSTPWR 130
>02_02_0219 +
7985152-7985575,7985818-7985894,7986067-7986127,
7986276-7986519,7986613-7987006,7987292-7987729
Length = 545
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 40 TPAEAPLPTPDA--SPVENEKENFQYE-ERRRTLNPSSISDTYSPYKSYRPGSYSPAPVA 210
+PA A + T D S N++ +F + +R+ T+NPSS S T + + + + + A VA
Sbjct: 252 SPAIATMQTLDFKNSSFRNQEWSFSFNHQRKETMNPSSSSSTTAAIRRWPSAAGAVAVVA 311
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +1
Query: 313 SQDQQALGTSTPRVSSAPSGPMNSEYSIQYHPYEQYEQMYKTEDPYVHYPEQP 471
SQ Q+ G P P+ P E ++ Y P + Y + PY+ P P
Sbjct: 366 SQPPQS-GMVNPSTPLPPAAPQQPEEAMSYAPPQSYPPNVRPPSPYMPPPSGP 417
>08_01_0264 -
2142856-2143152,2143667-2143829,2143915-2143992,
2144097-2144162,2144941-2145098
Length = 253
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Frame = +1
Query: 91 EKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAPVA----AMGMANGMYVMCTQRT 258
EKE + + + T P+ Y P+ + P Y AP+A A G A G +M
Sbjct: 171 EKETLEQQVKILTATPA-----YMPHPTLMPAPYPQAPLAPFHHAQGQAAGQKLM---MP 222
Query: 259 LTEQPPLVTGTFFPP--VATSQDQQA 330
P F PP V TS+D +A
Sbjct: 223 FVGYPGYPMWQFMPPSEVDTSKDSEA 248
>04_01_0611 -
8029101-8029205,8029985-8030107,8030191-8030556,
8030639-8031124
Length = 359
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/83 (31%), Positives = 34/83 (40%)
Frame = +3
Query: 42 SSRSSLTDPRCVSCRERERKLPVRGEAKDFEPFVDIRHVFSIQIIQARLLLASPRGRNGH 221
SSR RC E E + GE + P DI + + + RL+ G G
Sbjct: 70 SSRGGAARKRC-RMEEEEEEESSSGEPEP-APDPDIEEDYRVFLQNVRLV-----GHGGF 122
Query: 222 GQRHVRHVHTEDADGAAASSDRN 290
H +V DA GAA SSD +
Sbjct: 123 VLEHEGNVIRYDASGAALSSDES 145
>12_02_1283 - 27532143-27532517,27532602-27532906,27533053-27533311,
27534412-27534618,27534726-27535181,27535866-27535963,
27536657-27536785,27537371-27537605,27538932-27539039,
27539110-27539160,27539261-27539445,27540207-27540274,
27541535-27541600,27541678-27541730,27542536-27542653,
27542743-27542844,27543525-27543682,27543763-27543840,
27543978-27544069,27544308-27544458
Length = 1097
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 162 SIQIIQARLLLASPRGRNGHGQRHVRHVHTEDADGAAASSDRNILPASS 308
++Q+ ++ + G GQR RH HT+ + A SS +P+ S
Sbjct: 964 ALQLSMYGSMINDMKSGQGQGQRRQRHRHTKASSNKAHSSSYPRVPSRS 1012
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 259 LTEQPPLVTGTFFPPVATSQDQQALGTSTPRVSSAP 366
+T P PPVAT D + ++ PR+ SAP
Sbjct: 536 VTAPPATAPPMIAPPVATPPDSASSPSTVPRMPSAP 571
>06_01_0868 -
6606913-6607000,6607516-6608010,6610313-6610761,
6610863-6610979,6611892-6612863
Length = 706
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 37 STPAEAPL-PTPDASPVENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAPV 207
S P AP P + E + + QYEERR +L + P YR + P PV
Sbjct: 375 SVPQPAPQKPLEEMHHYEGKTQPHQYEERRSSL---PVMHVPPPKDLYRATRFDPHPV 429
>04_03_0630 -
18182681-18182931,18183397-18183463,18184899-18184964,
18185057-18185178,18185263-18185425,18186082-18186329,
18186418-18186751,18186857-18187000,18187079-18187144
Length = 486
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/106 (22%), Positives = 38/106 (35%)
Frame = +1
Query: 181 PGSYSPAPVAAMGMANGMYVMCTQRTLTEQPPLVTGTFFPPVATSQDQQALGTSTPRVSS 360
P + +PAPV Y + + E PP ++ P Q++Q V+
Sbjct: 243 PPAPAPAPVPQEEAPKKSYASIV-KVMKEIPPQISAIPSRPAPPKQEKQVAPAPVAPVAD 301
Query: 361 APSGPMNSEYSIQYHPYEQYEQMYKTEDPYVHYPEQPKTEYDTGGS 498
AP+ N E S +Y P PEQ + + G+
Sbjct: 302 APTFSPNPESSNIQEAEVDAHAIYVRNLPLSATPEQLEEAFKKFGA 347
>03_06_0648 +
35280492-35280645,35281742-35281820,35282491-35282593,
35282695-35282815,35283144-35283232,35283324-35283473,
35285842-35287161
Length = 671
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 280 VTGTFFPPVATSQDQQALGTSTPRVSSAPSGPMNSEYS 393
+ G F + S D+ +G S+P V + P GP +E S
Sbjct: 273 ILGRFPKKPSKSGDKDPIGRSSPSVPNPPLGPRGAERS 310
>03_02_0472 -
8737955-8738580,8738704-8738767,8739090-8739239,
8739311-8739422,8739686-8739708
Length = 324
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Frame = +1
Query: 64 TPDASPVENEKENFQYEE----------RRRTLNPSSISDTYSPYKSYRPGSYSP 198
+P SPVE ++ + +Y RRR+ +P + +YSPY+ R SYSP
Sbjct: 124 SPSYSPVERDRYSSRYSPERERSYSPYGRRRSYSPYNRRRSYSPYERRR--SYSP 176
>03_01_0178 +
1437263-1438017,1438754-1438858,1438950-1439072,
1439908-1440078,1440163-1440292,1440372-1440581,
1440675-1440773
Length = 530
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 23 RKAEEVLQPKLPYRP 67
RKAEEV+ PKLP +P
Sbjct: 442 RKAEEVVDPKLPEKP 456
>02_05_0202 + 26708049-26709074
Length = 341
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +3
Query: 195 ASPRGRNGHGQRHVRHVHTEDADGAAASSDRNILPASSHISRSTSF 332
ASPR GH + H V +A AAA++ L SS S STSF
Sbjct: 14 ASPRALAGHMRSH--SVAAANAAAAAAAAAAAKLQISSASSASTSF 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.129 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,797,790
Number of Sequences: 37544
Number of extensions: 459939
Number of successful extensions: 1352
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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