Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3749
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF332210-1|AAK17981.1| 253|Caenorhabditis elegans nuclear recep... 32 0.45
AF016438-13|AAK84531.2| 402|Caenorhabditis elegans Nuclear horm... 32 0.45
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 31 0.59
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 31 0.59
AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical ... 31 0.59
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 31 1.0
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 31 1.0
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.4
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 29 2.4
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 29 2.4
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL110485-14|CAB60362.1| 109|Caenorhabditis elegans Hypothetical... 29 3.2
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 4.2
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 4.2
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 4.2
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 29 4.2
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 28 7.3
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 28 7.3
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 28 7.3
Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 27 9.6
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 27 9.6
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 27 9.6
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 27 9.6
AC006833-8|AAF60944.1| 360|Caenorhabditis elegans Hypothetical ... 27 9.6
>AF332210-1|AAK17981.1| 253|Caenorhabditis elegans nuclear receptor
NHR-96 protein.
Length = 253
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = -2
Query: 646 HGTLCAVVEVFIELPWCRRRSRENPSLFLNEDS*IRPPVEDSAEVLPRNS 497
+G+ A+ E ++L WC + E +L+ DS + +ED E+ P ++
Sbjct: 107 NGSCLAIAEYEVDLSWCTNYTAEQLKYYLSPDSEGQKCIEDLIELSPSST 156
>AF016438-13|AAK84531.2| 402|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 96 protein.
Length = 402
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = -2
Query: 646 HGTLCAVVEVFIELPWCRRRSRENPSLFLNEDS*IRPPVEDSAEVLPRNS 497
+G+ A+ E ++L WC + E +L+ DS + +ED E+ P ++
Sbjct: 256 NGSCLAIAEYEVDLSWCTNYTAEQLKYYLSPDSEGQKCIEDLIELSPSST 305
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 31.5 bits (68), Expect = 0.59
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = +1
Query: 37 STPAEAPLPTPDASPVENEKENFQYEERRRTLNPSSI-SDTYSPYKSYRPGSYSPAPVA- 210
S PA P P P +PVE EK + T +PS + T +P S + AP A
Sbjct: 73 SKPATTPTPEPTTTPVEEEK--VKVSPSSSTKDPSKLHKTTKTPVTITNIISTTTAPPAP 130
Query: 211 AMGMANGMYVMCTQRTLTEQPPLVTGTFFPPVATSQDQQALGTST 345
+ N Q T+ L+ G AT +D++A ++T
Sbjct: 131 SRAPENDPESGSDQSESTDNLDLLYGGGSSATATGEDKKARHSTT 175
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +1
Query: 40 TPAEAPLPTP---DASPVENEKENFQYE 114
TP AP PTP A V NEK++F+YE
Sbjct: 813 TPPPAPTPTPHVPQALSVRNEKDDFEYE 840
>AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical
protein K06A5.4 protein.
Length = 877
Score = 31.5 bits (68), Expect = 0.59
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 84 RERERKLPVRGEAKDFEPFVDIRHVFSIQIIQARLLLASPRGRNGHGQRHVRHVHTEDAD 263
+ERER+L + +D E + R ++ +A L +P+ +NG +R D
Sbjct: 173 KERERRLEEEKQRRDAEAEAERRRKEEEELEEANYTLRAPKSQNGEPITPIRFTRGHDNG 232
Query: 264 GA 269
GA
Sbjct: 233 GA 234
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 37 STPAEAPL-PTPDASPVENEKENFQYEERRRTLNPSSISDTYSPYK-SYRPGS--YSP 198
S+P +P PT SP E + QY T +PS S TYSP SY P S Y P
Sbjct: 1795 SSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPS--SPTYSPASPSYSPSSPTYDP 1850
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 37 STPAEAPL-PTPDASPVENEKENFQYEERRRTLNPSSISDTYSPYK-SYRPGS--YSP 198
S+P +P PT SP E + QY T +PS S TYSP SY P S Y P
Sbjct: 1802 SSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSPS--SPTYSPASPSYSPSSPTYDP 1857
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2
Query: 344 PHACLRRPAAP*TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTT 487
P P T T + T PT T T T T TT ++ P TT
Sbjct: 81 PTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTT 128
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 374 P*TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTTP 490
P T T + T PT T T TPT TT + TTP
Sbjct: 132 PTTTTTETTTTPTTTTTETTT--TPTTTTTTPTTTTTTP 168
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +2
Query: 344 PHACLRRPAAP*TLNTASNTIPTNNTN-RCTKLKTPTCTTRSSLKPNTT 487
P P T T + T PT T T TPT TT ++ P TT
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTT 237
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 380 TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTT 487
T + T P T+ T TPT TT+++ KP TT
Sbjct: 238 TTTPTTTTTPATTTSETTTT-TPTTTTQTTTKPTTT 272
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 374 P*TLNTASNTIPTNNTNR-CTKLKTPTCTTRSSLKPNTTP 490
P T T + T PT T T TPT TT + TTP
Sbjct: 143 PTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTP 182
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +2
Query: 344 PHACLRRPAAP*TLNTASNTIPTNNTNR-CTKLKTPTCTTRSSLKPNTTP 490
P P T T + T PT T T TPT TT + TTP
Sbjct: 154 PTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTP 203
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 374 P*TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNT 484
P T T + T T T T TPT TT ++ P T
Sbjct: 78 PTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTT 114
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 389 TASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTTP 490
T S T T T T TPT TT + TTP
Sbjct: 69 TTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTP 102
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +2
Query: 344 PHACLRRPAAP*TLNTASNTIPTNNTNRCTKLKT-PTCTTRSSLKPNTTP 490
P P T T + T PT T T T PT TT + TTP
Sbjct: 161 PTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTP 210
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 29.5 bits (63), Expect = 2.4
Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 7/141 (4%)
Frame = +1
Query: 97 ENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAPVAAMGMANGMYVMCTQRTLTEQPP 276
++ Q++ + + S+ Y S + P PVAA + Y T T Q P
Sbjct: 583 QSSQHQTKSIPVQNYQSSNYNKSYSSQTTTQHQPQPVAANNNYSTSYHTERSSTTTAQQP 642
Query: 277 LVTGTFFPPVATSQDQQALGTSTPRVSSAPSG--PMNSEY-SIQYHPYEQYEQMYKTEDP 447
T PP S + ++ P + +P G ++E+ S ++H E T P
Sbjct: 643 -QTIALPPPQNNSSHTETHSSTGPIMMHSPGGHSMKSTEFSSSRHHKQETTTTTTTTPQP 701
Query: 448 YVH----YPEQPKTEYDTGGS 498
V YP T Y+ S
Sbjct: 702 PVFQTTTYPTTKTTSYNYSSS 722
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +1
Query: 46 AEAPLPTPDASPVENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAP-VAAMGM 222
+EA PD PV+++ EN ++ + + P I ++P +Y+P+ VA
Sbjct: 94 SEATHEAPDNYPVDHQMENQEFYQEPQIPEPQQIPQ----ISVFQPAAYNPSNYVAPQQR 149
Query: 223 AN--GMYVMCTQRTLTEQPPL 279
AN G R LTE+ L
Sbjct: 150 ANNFGEPAAADARPLTEEEQL 170
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 374 P*TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTTP 490
P T T + T T T T TPT TT + TTP
Sbjct: 85 PSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTP 123
>AL110485-14|CAB60362.1| 109|Caenorhabditis elegans Hypothetical
protein Y46G5A.20 protein.
Length = 109
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 513 TSAESSTGGRIHESSFRNKDGFSRLRRRHQGSSINTSTTAQRVPWINTSSTDTSNNA 683
+S+ SST +S + D +L R+Q +++ S++ V + SS D+S+++
Sbjct: 44 SSSSSSTSSSSSSNSSESDDQVGQLSTRYQNQNLSESSSESSVSSSDDSSDDSSDDS 100
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 371 AP*TLNTASNT-IPTNNTNRCTKLKTPTCTTRSSLKPNTT 487
AP T TAS T T T+ TPT TT ++ KP TT
Sbjct: 318 APTTTTTASTTTFKTTTITTTTQTTTPT-TTATTTKPTTT 356
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 374 P*TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTTP 490
P T + + T T T T TP TT S++ P T P
Sbjct: 686 PTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRP 724
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 374 P*TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTTP 490
P T + + T T T T TP TT S++ P T P
Sbjct: 742 PTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRP 780
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 374 P*TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTTP 490
P T + + T T T T TP TT S++ P T P
Sbjct: 565 PTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTITPTTRP 603
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 28.7 bits (61), Expect = 4.2
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +1
Query: 46 AEAPLPTPDASPVENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAP-VAAMGM 222
+EA PD PV+++ EN ++ + P I ++P +Y+P VA
Sbjct: 80 SEATHEAPDNYPVDHQMENQEFYHEPQIPEPQQIPQ----IPVFQPAAYNPPNYVAPQQR 135
Query: 223 AN--GMYVMCTQRTLTEQPPL 279
AN G R LTEQ L
Sbjct: 136 ANNFGEPAAADARPLTEQEQL 156
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +2
Query: 341 QPHACLRRPAAP*TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTT 487
+P P T +T + T PT T T T +T ++ P TT
Sbjct: 57 EPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTT 105
>Z46241-3|CAA86317.1| 556|Caenorhabditis elegans Hypothetical
protein C38D4.4 protein.
Length = 556
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 195 ASPRGRNGHGQRH-VRHVHTEDADGAAASSDRNILPASSHISRSTSFGHVNPTRVFGAQR 371
A+P G R+ VRH + SS N S H +RST+ G V AQR
Sbjct: 144 ANPAKPQATGYRNTVRHPPVRPSTATGHSSFANRSAYSHHTTRSTTVGPVKIAPSATAQR 203
Query: 372 P 374
P
Sbjct: 204 P 204
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 43 PAEAPLPTPDASPVENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSP 198
PA AP PTP A V + KE F + L ++ SP K G+ SP
Sbjct: 369 PAPAPAPTPSAGLVGSRKELFSSKPSGPVLPKPQVNG--SPKKWPPVGTTSP 418
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +1
Query: 37 STPAEAPLPTPDASPVENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGS 189
S PA P P P +PVE EK + T PS ++ PG+
Sbjct: 114 SKPATTPTPEPTTTPVEEEK--VKVSPSSSTKEPSPYAENIMLTPKQAPGT 162
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 27.9 bits (59), Expect = 7.3
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 11/83 (13%)
Frame = -2
Query: 391 CIQSSWGRWAP---KTRVGLTC-PKLVDLEMWLLAGRMFRSL-EAAAPSASSVCT----- 242
CI SWG W P +G +L D E+ A + R+ + PSA S+
Sbjct: 851 CISQSWGDWLPCSVSCGIGFQIRERLCDGELCATANKQARTCNQQQCPSAFSLSVWSEWG 910
Query: 241 -*RTCRWPCPLRPRGLASRSRAC 176
TC C GL SR R+C
Sbjct: 911 EWTTCSATC---GEGLQSRERSC 930
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 27.9 bits (59), Expect = 7.3
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 11/83 (13%)
Frame = -2
Query: 391 CIQSSWGRWAP---KTRVGLTC-PKLVDLEMWLLAGRMFRSL-EAAAPSASSVCT----- 242
CI SWG W P +G +L D E+ A + R+ + PSA S+
Sbjct: 851 CISQSWGDWLPCSVSCGIGFQIRERLCDGELCATANKQARTCNQQQCPSAFSLSVWSEWG 910
Query: 241 -*RTCRWPCPLRPRGLASRSRAC 176
TC C GL SR R+C
Sbjct: 911 EWTTCSATC---GEGLQSRERSC 930
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 27.9 bits (59), Expect = 7.3
Identities = 24/107 (22%), Positives = 42/107 (39%)
Frame = +1
Query: 55 PLPTPDASPVENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAPVAAMGMANGM 234
P P P A EN++ E RRT+ + + + K+ S +P +
Sbjct: 334 PPPAPKAPQKENKEGGEMTETPRRTITKTPLKTVNAKAKT----SPTPPVERQKKERKPL 389
Query: 235 YVMCTQRTLTEQPPLVTGTFFPPVATSQDQQALGTSTPRVSSAPSGP 375
YV + E+ + T+ +++ + +S P SSA GP
Sbjct: 390 YVAPPAKERVEKEKKIPSKPVVSPPTTAEKKPVVSSIPSTSSASKGP 436
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 27.9 bits (59), Expect = 7.3
Identities = 24/107 (22%), Positives = 42/107 (39%)
Frame = +1
Query: 55 PLPTPDASPVENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAPVAAMGMANGM 234
P P P A EN++ E RRT+ + + + K+ S +P +
Sbjct: 402 PPPAPKAPQKENKEGGEMTETPRRTITKTPLKTVNAKAKT----SPTPPVERQKKERKPL 457
Query: 235 YVMCTQRTLTEQPPLVTGTFFPPVATSQDQQALGTSTPRVSSAPSGP 375
YV + E+ + T+ +++ + +S P SSA GP
Sbjct: 458 YVAPPAKERVEKEKKIPSKPVVSPPTTAEKKPVVSSIPSTSSASKGP 504
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 27.9 bits (59), Expect = 7.3
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 11/83 (13%)
Frame = -2
Query: 391 CIQSSWGRWAP---KTRVGLTC-PKLVDLEMWLLAGRMFRSL-EAAAPSASSVCT----- 242
CI SWG W P +G +L D E+ A + R+ + PSA S+
Sbjct: 851 CISQSWGDWLPCSVSCGIGFQIRERLCDGELCATANKQARTCNQQQCPSAFSLSVWSEWG 910
Query: 241 -*RTCRWPCPLRPRGLASRSRAC 176
TC C GL SR R+C
Sbjct: 911 EWTTCSATC---GEGLQSRERSC 930
>Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical
protein F29C12.1b protein.
Length = 590
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 298 PPVATSQDQQALGTSTPRVSSAPSGPMNSEYSIQYHPYEQYEQMYKTEDPYVHYPEQPKT 477
PP +Q Q A +T ++S+ GP Q +Q + ++ + P + P QP
Sbjct: 72 PPAFNNQPQFAQSVNTRQISNE-GGPQVQRPQHQQQFQQQVQAQHQQQQPQFNIPLQPHA 130
Query: 478 E 480
+
Sbjct: 131 Q 131
>Z78540-4|CAB01734.2| 624|Caenorhabditis elegans Hypothetical
protein C33G3.6 protein.
Length = 624
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 388 YSIQYHPYEQYEQMYKTEDPYVHYPEQPKTEYD 486
Y YHPY + Q Y +PY E +EY+
Sbjct: 419 YGRNYHPYNNHHQQY---NPYNQVLENSSSEYN 448
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 37 STPAEAPLPTPDASPVENEK 96
S PA P P P +PVE EK
Sbjct: 73 SKPATTPTPEPTTTPVEEEK 92
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 37 STPAEAPLPTPDASPVENEK 96
S PA P P P +PVE EK
Sbjct: 73 SKPATTPTPEPTTTPVEEEK 92
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.5 bits (58), Expect = 9.6
Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 9/142 (6%)
Frame = +1
Query: 85 ENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAPVAAMGMANGMYVMCTQRTLT 264
E+ +N++ R LNP+ IS Y P ++ A + T T T
Sbjct: 368 ESYYKNWKPYRRPFDLNPTQISINNLSAIVYPPKNFVKATKSTSSSTTTTTTTTTTTTTT 427
Query: 265 EQPPLVT--GTFFPPVATSQ-DQQALGTSTPRVSSAP---SGPMNSEY---SIQYHPYEQ 417
E P T +PP + + T+T + + P + EY + Q +
Sbjct: 428 EAPTTTTTEPIIYPPANFKKASKTTTSTTTEMIYTLPVVKEEDQSEEYQQENRQMVEMPK 487
Query: 418 YEQMYKTEDPYVHYPEQPKTEY 483
EQ + ED ++ P+ P + +
Sbjct: 488 IEQSEEVEDVVMYTPKPPPSRH 509
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.5 bits (58), Expect = 9.6
Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 9/142 (6%)
Frame = +1
Query: 85 ENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAPVAAMGMANGMYVMCTQRTLT 264
E+ +N++ R LNP+ IS Y P ++ A + T T T
Sbjct: 368 ESYYKNWKPYRRPFDLNPTQISINNLSAIVYPPKNFVKATKSTSSSTTTTTTTTTTTTTT 427
Query: 265 EQPPLVT--GTFFPPVATSQ-DQQALGTSTPRVSSAP---SGPMNSEY---SIQYHPYEQ 417
E P T +PP + + T+T + + P + EY + Q +
Sbjct: 428 EAPTTTTTEPIIYPPANFKKASKTTTSTTTEMIYTLPVVKEEDQSEEYQQENRQMVEMPK 487
Query: 418 YEQMYKTEDPYVHYPEQPKTEY 483
EQ + ED ++ P+ P + +
Sbjct: 488 IEQSEEVEDVVMYTPKPPPSRH 509
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 380 TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTT 487
T T + +PT T + T T TT ++ +P TT
Sbjct: 218 TTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTT 253
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 380 TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTT 487
T T + +PT T + T T TT ++ +P TT
Sbjct: 214 TTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTT 249
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 380 TLNTASNTIPTNNTNRCTKLKTPTCTTRSSLKPNTT 487
T T + +PT T + T T TT ++ +P TT
Sbjct: 157 TTTTTTTPLPTTTTTQPTTTTTEPTTTTTTTEPTTT 192
>AC006833-8|AAF60944.1| 360|Caenorhabditis elegans Hypothetical
protein ZK616.8 protein.
Length = 360
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 70 DASPVENEKENFQYEERRRTLNPSSISDTYSPYKSYRPGSYSPAP 204
+ S K F ++RR + S SDT S +K+ R G PAP
Sbjct: 155 NGSKNSKSKTKFSPNQKRREVKKSD-SDTESSHKNTRRGKPVPAP 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.129 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,869,926
Number of Sequences: 27780
Number of extensions: 349495
Number of successful extensions: 1301
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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