Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3749
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   8.4  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   8.4  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   8.4  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 225 QRHVRHVHTEDADGAAASSDRN 290
           +RH+   H  DADG    ++ N
Sbjct: 101 ERHITLHHCYDADGIKLMNEEN 122


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 202 PVAAMGMANGMYVMCTQRTLTEQPPLVTGTFFP 300
           P   +G+ N M   CT   L+    L  GT+FP
Sbjct: 18  PEKIIGLHNNM---CTSLNLSNLFWLFVGTYFP 47


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 225 QRHVRHVHTEDADGAAASSDRN 290
           +RH+   H  DADG    ++ N
Sbjct: 101 ERHITLHHCYDADGIKLMNEEN 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.129    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,431
Number of Sequences: 438
Number of extensions: 4535
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)