Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3746
         (614 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X89602-1|CAA61761.1|  416|Homo sapiens rTSbeta protein.                73   1e-12
X67098-2|CAA47472.1|  361|Homo sapiens protein ( H.sapiens rTS a...    73   1e-12
BC001285-1|AAH01285.2|  443|Homo sapiens enolase superfamily mem...    73   1e-12
AK127818-1|BAC87148.1|  474|Homo sapiens protein ( Homo sapiens ...    73   1e-12
AF305057-2|AAG29536.1|  361|Homo sapiens RTS alpha protein.            73   1e-12
AF305057-1|AAG29537.1|  416|Homo sapiens RTS beta protein.             73   1e-12
AB030816-1|BAB08110.1|  168|Homo sapiens H-REV107 protein-relate...    30   7.5  
BC048095-1|AAH48095.1|  168|Homo sapiens HRAS-like suppressor pr...    29   9.9  

>X89602-1|CAA61761.1|  416|Homo sapiens rTSbeta protein.
          Length = 416

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -3

Query: 198 IGPEKGVTHLAVAAIINSLWDLWARIENKPLWRLLSDMDP 79
           IGPEKGV HLA AA++N++WDLWA+ E KP+W+LL DMDP
Sbjct: 77  IGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDP 116


>X67098-2|CAA47472.1|  361|Homo sapiens protein ( H.sapiens rTS
           alpha mRNA containing four open reading frames. ).
          Length = 361

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -3

Query: 198 IGPEKGVTHLAVAAIINSLWDLWARIENKPLWRLLSDMDP 79
           IGPEKGV HLA AA++N++WDLWA+ E KP+W+LL DMDP
Sbjct: 22  IGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDP 61


>BC001285-1|AAH01285.2|  443|Homo sapiens enolase superfamily member
           1 protein.
          Length = 443

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -3

Query: 198 IGPEKGVTHLAVAAIINSLWDLWARIENKPLWRLLSDMDP 79
           IGPEKGV HLA AA++N++WDLWA+ E KP+W+LL DMDP
Sbjct: 104 IGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDP 143


>AK127818-1|BAC87148.1|  474|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45920 fis, clone PLACE6003004, highly  similar
           to Homo sapiens rTS beta protein (HSRTSBETA). ).
          Length = 474

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -3

Query: 198 IGPEKGVTHLAVAAIINSLWDLWARIENKPLWRLLSDMDP 79
           IGPEKGV HLA AA++N++WDLWA+ E KP+W+LL DMDP
Sbjct: 149 IGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDP 188


>AF305057-2|AAG29536.1|  361|Homo sapiens RTS alpha protein.
          Length = 361

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -3

Query: 198 IGPEKGVTHLAVAAIINSLWDLWARIENKPLWRLLSDMDP 79
           IGPEKGV HLA AA++N++WDLWA+ E KP+W+LL DMDP
Sbjct: 22  IGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDP 61


>AF305057-1|AAG29537.1|  416|Homo sapiens RTS beta protein.
          Length = 416

 Score = 72.5 bits (170), Expect = 1e-12
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -3

Query: 198 IGPEKGVTHLAVAAIINSLWDLWARIENKPLWRLLSDMDP 79
           IGPEKGV HLA AA++N++WDLWA+ E KP+W+LL DMDP
Sbjct: 77  IGPEKGVVHLATAAVLNAVWDLWAKQEGKPVWKLLVDMDP 116


>AB030816-1|BAB08110.1|  168|Homo sapiens H-REV107 protein-related
           protein protein.
          Length = 168

 Score = 29.9 bits (64), Expect = 7.5
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 366 VMKSHFLI*FERQWNLLI*KSNHFYTLLKFG 458
           + +S F+I  E  +NLL+    HF TLL++G
Sbjct: 99  IKRSEFVIGQEVAYNLLVNNCEHFVTLLRYG 129


>BC048095-1|AAH48095.1|  168|Homo sapiens HRAS-like suppressor
           protein.
          Length = 168

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 366 VMKSHFLI*FERQWNLLI*KSNHFYTLLKFG 458
           + +S F+I  E  +NLL+    HF TLL++G
Sbjct: 99  IKRSEFVIGQEVAYNLLVNDCEHFVTLLRYG 129


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,154,631
Number of Sequences: 237096
Number of extensions: 2032491
Number of successful extensions: 2786
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2786
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)