Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3745
         (507 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034502-1|AAH34502.1|  594|Homo sapiens choline dehydrogenase p...    36   0.061
AK074473-1|BAB85091.1|  178|Homo sapiens protein ( Homo sapiens ...    31   2.3  
BC006131-1|AAH06131.1|  581|Homo sapiens chromosome 10 open read...    30   4.0  
AL139243-4|CAI14149.1|  581|Homo sapiens chromosome 10 open read...    30   4.0  
AK075265-1|BAC11507.1|  581|Homo sapiens protein ( Homo sapiens ...    30   4.0  

>BC034502-1|AAH34502.1|  594|Homo sapiens choline dehydrogenase
           protein.
          Length = 594

 Score = 36.3 bits (80), Expect = 0.061
 Identities = 16/31 (51%), Positives = 23/31 (74%)
 Frame = +3

Query: 414 EYHFIIVGAGSTGAVLANRLSKIGYWKILLL 506
           EY +++VGAGS G VLA RL++    ++LLL
Sbjct: 40  EYSYVVVGAGSAGCVLAGRLTEDPAERVLLL 70


>AK074473-1|BAB85091.1|  178|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23893 fis, clone LNG14589. ).
          Length = 178

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
 Frame = -3

Query: 457 TAPVEPAPTIMKW------YSGSISSLTSVGRPSGSVRSYW*YAIAATSIGTNQATCEPV 296
           T P  PAPT ++W       S +IS+ TS GR     R  W     +   GT  A C P 
Sbjct: 2   TCPAAPAPTPLRWPTARPTSSTAISARTSAGRTPAGPRRSW--RSTSPLPGTASAPCCPW 59

Query: 295 AAAIAVPDSTSAAAFT 248
            A      ST+A A T
Sbjct: 60  RAP-RWRHSTAATATT 74


>BC006131-1|AAH06131.1|  581|Homo sapiens chromosome 10 open reading
           frame 33 protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 387 TDVSDEILPEYHFIIVGAGSTGAVLANRLSKIG 485
           T+    + PEY  +++GAG  G V A  L ++G
Sbjct: 25  TEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLG 57


>AL139243-4|CAI14149.1|  581|Homo sapiens chromosome 10 open reading
           frame 33 protein.
          Length = 581

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 387 TDVSDEILPEYHFIIVGAGSTGAVLANRLSKIG 485
           T+    + PEY  +++GAG  G V A  L ++G
Sbjct: 25  TEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLG 57


>AK075265-1|BAC11507.1|  581|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90784 fis, clone THYRO1001456. ).
          Length = 581

 Score = 30.3 bits (65), Expect = 4.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 387 TDVSDEILPEYHFIIVGAGSTGAVLANRLSKIG 485
           T+    + PEY  +++GAG  G V A  L ++G
Sbjct: 25  TEARGGLKPEYDAVVIGAGHNGLVAAAYLQRLG 57


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,402,182
Number of Sequences: 237096
Number of extensions: 1309504
Number of successful extensions: 6368
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6366
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)