Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3745
         (507 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    42   5e-06
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   0.79 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.6  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   7.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   7.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.7  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 41.5 bits (93), Expect = 5e-06
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +3

Query: 417 YHFIIVGAGSTGAVLANRLSKIGYWKILLL 506
           Y FI+VG G+  AV+A RLS++  WK+LLL
Sbjct: 69  YDFIVVGGGAARAVVAGRLSEVSNWKVLLL 98



 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 130 KYINKTTLTQICSHETRKTILKLCDRFIK 44
           K +N T +  +   E +K  LK CD F++
Sbjct: 498 KLVNTTVMRDL-GVEFQKIELKQCDEFVE 525


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 78  KQFLNCVIDLLNWFEIDRLFAP 13
           KQF+  + DLL +   DR FAP
Sbjct: 226 KQFMPRLYDLLGYVMPDRTFAP 247


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +3

Query: 261 ADVLSGTAIAAATGSQVAWFVPMLVAAIAYYQYDRTD---PEGRPTDVSDEIL 410
           +DV +G  I A    Q A    +L A +   QY R     P+G  T++SD++L
Sbjct: 44  SDVHTGILIKALLTVQ-AKDSNVLAAKVWNGQYARVQQSMPDGWETEISDQML 95


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 375 PDLSGRIGSTLSRLPA 328
           PD +GR    L RLPA
Sbjct: 375 PDDAGRFAKLLLRLPA 390


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 375 PDLSGRIGSTLSRLPA 328
           PD +GR    L RLPA
Sbjct: 375 PDDAGRFAKLLLRLPA 390


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 170 IFNSEFLSLVPVYL 211
           +  +EFLS++P++L
Sbjct: 141 VLANEFLSILPIFL 154


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 170 IFNSEFLSLVPVYL 211
           +  +EFLS++P++L
Sbjct: 179 VLANEFLSILPIFL 192


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 155 RRVNTKQHKIYKQNDPNANLFTRNSQNNS 69
           +  N +     K N  NAN    N+QN++
Sbjct: 424 QNTNNQNDNNQKNNKKNANNQKNNNQNDN 452


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,129
Number of Sequences: 438
Number of extensions: 2628
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)