Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3736
(340 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0597 - 4433105-4433467,4433671-4433860,4434569-4434786,443... 31 0.30
03_01_0515 - 3864796-3865425 28 1.6
12_02_1174 - 26696869-26698191 28 2.1
03_01_0371 + 2883418-2883967,2884097-2884176,2886283-2886339,288... 28 2.1
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147... 27 3.8
07_03_1432 - 26508135-26508881,26509301-26509708 27 3.8
07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733 27 3.8
01_07_0117 + 41171919-41172395 27 3.8
04_03_0630 - 18182681-18182931,18183397-18183463,18184899-181849... 27 5.0
03_02_0384 - 7972067-7972162,7972776-7972985,7973083-7973286,797... 26 6.6
12_02_1124 + 26301884-26303725 26 8.7
12_02_1123 - 26250300-26250362,26251988-26252042,26252128-262522... 26 8.7
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 26 8.7
07_01_0469 - 3552409-3553368 26 8.7
05_07_0081 - 27572047-27572925,27573285-27573419 26 8.7
01_06_1246 - 35703119-35703811,35704033-35704074,35704355-357045... 26 8.7
>02_01_0597 -
4433105-4433467,4433671-4433860,4434569-4434786,
4434882-4436556,4437137-4438113
Length = 1140
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 114 NRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKPPSASP 1
N+ RL P+ APE+ IE+P +P P+P + P
Sbjct: 97 NKARLHDGAPRPAPES---IEIPQPSIPPPPRPQDSPP 131
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -2
Query: 96 PVKPKTAPETNTIIEVPTTVLPKEPKPPSASP 1
P+ P P + P LP P PP+ASP
Sbjct: 68 PLMPPPPPPPSVTSSPPPPPLPPPPPPPAASP 99
>12_02_1174 - 26696869-26698191
Length = 440
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 117 KNRTRLRPVKPKTAP-ETNTIIEVPTTVLPKEPKPPSASP 1
K L PV P P T T +E P P +P+PP + P
Sbjct: 114 KTPPALSPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLP 153
>03_01_0371 +
2883418-2883967,2884097-2884176,2886283-2886339,
2887152-2887207,2888006-2888079,2889511-2889798,
2890043-2890120,2890359-2890882,2891315-2891438,
2891619-2891767,2891983-2892137,2892477-2892682,
2892768-2892901,2892983-2893284,2893514-2893617,
2893858-2893928
Length = 983
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 81 TAPETNTIIEVPTTVLPKEPKPPSASP 1
+AP+ N PT P +PKP S +P
Sbjct: 51 SAPDFNITFAEPTAPAPSKPKPSSPAP 77
>10_08_0959 - 21813756-21814097,21814462-21814570,21814688-21814740,
21814849-21815049,21815320-21815433,21815513-21815671,
21816490-21816849,21816928-21817149,21817967-21818093,
21818887-21819023,21819169-21819292,21819665-21820174,
21820255-21820436,21820812-21820862,21821114-21821266,
21821339-21821437,21821519-21821861,21821957-21822030,
21822105-21823025,21823133-21823257,21823419-21823461,
21823574-21823762,21824814-21825074,21825228-21825387,
21826200-21826363,21826523-21827009,21827090-21827431,
21827519-21827836,21828001-21828041,21828136-21828388,
21829158-21829261,21830198-21830386,21830543-21831196,
21831320-21831610,21831739-21831882,21832107-21832205,
21832549-21832657,21832739-21832923,21833008-21833121,
21833270-21833401,21833483-21833815,21833945-21834436,
21834773-21834847,21834917-21835066,21835143-21835241,
21835463-21835547,21837188-21837375,21837513-21837647,
21837729-21837849,21838127-21838194,21838275-21838370,
21838450-21838554,21838665-21838980,21839053-21839142,
21840011-21840181,21840850-21841010,21841088-21841270,
21841839-21841940,21842515-21842632,21842704-21842798,
21842972-21843022,21843107-21843241,21843333-21843436,
21844249-21844414,21844649-21844773,21845220-21845316
Length = 4181
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 49 HLNYCIGFGRRFWFDRSETSAIFFVSNSFQQLLS 150
+L+ CI G W+ SE ++ VS + + LLS
Sbjct: 1867 YLDSCISLGSNCWYSASENDHVYLVSEN-EGLLS 1899
>07_03_1432 - 26508135-26508881,26509301-26509708
Length = 384
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 48 PTTVLPKEPKPPSASP 1
PTT LP P PPS +P
Sbjct: 66 PTTYLPPSPTPPSPAP 81
>07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733
Length = 181
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 87 PKTAPETNTIIEVPTTVLPKEPKPPSA 7
P AP+T T+ + P EP PP A
Sbjct: 120 PPPAPDTPTLADEPAETNEDEPSPPPA 146
>01_07_0117 + 41171919-41172395
Length = 158
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 102 LRPVKPKTAPETNTIIEVPTTVLPKEPKPPS 10
+ P+ P P+++ E P+ V+P P PS
Sbjct: 73 IMPLLPSPGPDSDGSAEAPSDVMPTIPSSPS 103
>04_03_0630 -
18182681-18182931,18183397-18183463,18184899-18184964,
18185057-18185178,18185263-18185425,18186082-18186329,
18186418-18186751,18186857-18187000,18187079-18187144
Length = 486
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 135 EAIRNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKPPSASP 1
E + N N T PV +T P I EVP V P PP+ +P
Sbjct: 206 EEVYNPPNNTE-GPVVEET-PIPEVIDEVPNNVAVAMPTPPAPAP 248
>03_02_0384 -
7972067-7972162,7972776-7972985,7973083-7973286,
7973381-7973497,7973692-7973810,7974001-7974341,
7974492-7974646,7974948-7975109,7975262-7975321
Length = 487
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 126 RNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEP-KPPSAS 4
R + ++T P KPK P+T I+ T EP P AS
Sbjct: 369 RGDDSKTCATPKKPKIEPDTKKIVVKEETSCSLEPTSEPFAS 410
>12_02_1124 + 26301884-26303725
Length = 613
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 111 RTRLRPVKPKTAPE-TNTIIEVPTTVLPKEPKPPSASP 1
R +R +P+ A TN+++ P++V P PP P
Sbjct: 27 RNSVRFTRPRAAAAATNSVLSAPSSVPPAYVPPPPPPP 64
>12_02_1123 -
26250300-26250362,26251988-26252042,26252128-26252224,
26252364-26253048,26253354-26253721,26253931-26254074,
26254925-26255276
Length = 587
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 93 VKPKTAPETNTIIE-VPTTVLPKEPKPPSAS 4
+ P P+ T + P ++LP P PPS+S
Sbjct: 57 IPPPRIPDHLTALSPAPVSLLPSSPPPPSSS 87
>09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -2
Query: 156 DDRQQLLEAIRNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKPPSAS 4
D+ + LE + + ++L ++P AP + + +VP T +P P P AS
Sbjct: 922 DELEAELEELEGAELESQL--LEPVAAPPVHPV-QVPGTRIPTRPAPQKAS 969
>07_01_0469 - 3552409-3553368
Length = 319
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 93 VKPKTAPETNTIIEVPTTVLPKEPKPPSASP 1
V+ +T P +T V + P+ P PPSA+P
Sbjct: 185 VRIRTTPRKSTTAPVRIQLAPRNP-PPSAAP 214
>05_07_0081 - 27572047-27572925,27573285-27573419
Length = 337
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 69 TNTIIEVPTTVLPKEPKPPSASP 1
T+ ++ + +LP +PKPP SP
Sbjct: 54 TSNLLPPHSPLLPSQPKPPGHSP 76
>01_06_1246 -
35703119-35703811,35704033-35704074,35704355-35704576,
35705077-35705466,35705560-35705637
Length = 474
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -2
Query: 156 DDRQQLLEAIRNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKPPSASP 1
D R+ +E ++R + K K + + + VPT+ P P+PP P
Sbjct: 21 DGREAKIEKADKSRSRRKWPFGKSKKSDPWTSTVAVPTSTAP-PPQPPPPPP 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,535,272
Number of Sequences: 37544
Number of extensions: 90715
Number of successful extensions: 419
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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