Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3736
(340 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-2|CAA94760.1| 275|Caenorhabditis elegans Hypothetical pr... 31 0.28
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 30 0.49
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 30 0.49
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 29 0.85
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 29 0.85
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 29 0.85
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 29 0.85
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 28 2.0
AL021492-7|CAE17999.1| 282|Caenorhabditis elegans Hypothetical ... 28 2.0
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 28 2.0
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 27 3.4
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z81592-2|CAB04726.1| 407|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 26 7.9
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 26 7.9
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 26 7.9
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 26 7.9
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 26 7.9
>Z70753-2|CAA94760.1| 275|Caenorhabditis elegans Hypothetical
protein F40F9.3 protein.
Length = 275
Score = 30.7 bits (66), Expect = 0.28
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 156 DDRQQLLEAIRNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKP 16
D + ++ + NE+NR +L+ V+PK P P P EPKP
Sbjct: 227 DGHKSVMIRMDNEENRNKLKKVEPKEPPRRLDPKTPPKPAAP-EPKP 272
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 29.9 bits (64), Expect = 0.49
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 99 RPVKPKTAPETNTIIEVPTTVLPKEPKPPSASP 1
+PV+ T P T ++VP LP + +PP P
Sbjct: 341 QPVQVMTPPPTLPPVQVPIQTLPPQTRPPQLPP 373
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 29.9 bits (64), Expect = 0.49
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 99 RPVKPKTAPETNTIIEVPTTVLPKEPKPPSASP 1
+PV+ T P T ++VP LP + +PP P
Sbjct: 438 QPVQVMTPPPTLPPVQVPIQTLPPQTRPPQLPP 470
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.1 bits (62), Expect = 0.85
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 126 RNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKP 16
+NE + T P P P T+++ VP+ +P P P
Sbjct: 666 KNELDSTTETPPDPSRTPSTSSMNPVPSLAVPMSPGP 702
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.1 bits (62), Expect = 0.85
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 126 RNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKP 16
+NE + T P P P T+++ VP+ +P P P
Sbjct: 666 KNELDSTTETPPDPSRTPSTSSMNPVPSLAVPMSPGP 702
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.1 bits (62), Expect = 0.85
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 126 RNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKP 16
+NE + T P P P T+++ VP+ +P P P
Sbjct: 666 KNELDSTTETPPDPSRTPSTSSMNPVPSLAVPMSPGP 702
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 0.85
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = -2
Query: 150 RQQLLEAIRNEKNRTRLRPVK---PKTAPETNTIIEVPTTVLPKEPKPPSASP 1
R+ +A+ EK R P K P AP++ +E + K+PK P P
Sbjct: 1416 REAKKKAVEKEKKEHRKEPKKTNEPGPAPKSEKAVEKAVEKVEKKPKSPQKPP 1468
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -2
Query: 150 RQQLLEAIRNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKPP 13
R+QL + NE + P+TA T T I P P +PP
Sbjct: 143 REQLKKQKSNENVSEMSQRSAPRTAASTRTAISAPPPPRPPPQEPP 188
>AL021492-7|CAE17999.1| 282|Caenorhabditis elegans Hypothetical
protein Y45F10D.14 protein.
Length = 282
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 75 PETNTIIEVPTTVLPKEPKPPSASP 1
P T+ ++PTT PK P PPSA+P
Sbjct: 87 PPGYTVPQLPTT--PKYPGPPSAAP 109
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/50 (20%), Positives = 27/50 (54%)
Frame = -2
Query: 150 RQQLLEAIRNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKPPSASP 1
+++ +E ++ ++ + + +P + AP++ +E + K+PK P P
Sbjct: 424 KKKAVEKVKEKEKKEQRKPNESGPAPKSEKAVEKAEEKVEKKPKSPQKPP 473
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = -2
Query: 153 DRQQLLEAIRNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKPPSAS 4
++ + +EA +++K+ T+ +P++P A + TT + KEP SAS
Sbjct: 702 EKSKEIEA-KSKKDDTK-KPLEPSAASSDPSSSSTTTTTITKEPPTQSAS 749
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 153 DRQQLLEAIRNEKN-RTRLRPVKPKTAPETNTIIEVPTTVL-PKEPKPPSASP 1
D +++E+ R+ + K P +E P T+ P +PKPP SP
Sbjct: 163 DEDEVVESSRSRVEIGNGVEQPKIDIGPRVAQTVEEPVTLAAPPQPKPPKPSP 215
>Z81592-2|CAB04726.1| 407|Caenorhabditis elegans Hypothetical
protein T16G1.2 protein.
Length = 407
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 60 IIEVPTTVLPKEPKPP 13
+I +PTTV P +P PP
Sbjct: 378 LIPLPTTVRPSQPPPP 393
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -3
Query: 200 LNCHPLHQCRLKHL*TTDN-NCWKLLETKKIALVS 99
L CH H CRLK T +CW+ AL++
Sbjct: 1238 LTCHRNHDCRLKRTSPTAYCDCWEKSSCNCKALIA 1272
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -3
Query: 200 LNCHPLHQCRLKHL*TTDN-NCWKLLETKKIALVS 99
L CH H CRLK T +CW+ AL++
Sbjct: 1238 LTCHRNHDCRLKRTSPTAYCDCWEKSSCNCKALIA 1272
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 126 RNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKP 16
+N+KN R + +T P+ E P + K+PKP
Sbjct: 14 KNKKNHQRPQQQHQQTQPQPLPEEEQPENPIKKDPKP 50
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 126 RNEKNRTRLRPVKPKTAPETNTIIEVPTTVLPKEPKP 16
+N+KN R + +T P+ E P + K+PKP
Sbjct: 14 KNKKNHQRPQQQHQQTQPQPLPEEEQPENPIKKDPKP 50
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = -2
Query: 135 EAIRNEKNRTRLRPVK---PKTAPETNTIIEVPTTVLPKEPKPPSASP 1
+A EK R P K P AP++ +E + K+PK P P
Sbjct: 1442 KAKEKEKKEHRKEPKKANEPGPAPKSEKAVEKAVEKVEKKPKSPQKPP 1489
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,635,425
Number of Sequences: 27780
Number of extensions: 82205
Number of successful extensions: 445
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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