Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3721
         (591 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071401-1|AAL49023.1|  592|Drosophila melanogaster RE48767p pro...    31   0.88 
AE014296-978|AAF50762.2|  592|Drosophila melanogaster CG10590-PA...    31   0.88 
BT025194-1|ABF17885.1| 1171|Drosophila melanogaster FI01301p pro...    30   2.0  
BT016154-1|AAV37039.1| 1171|Drosophila melanogaster AT13664p pro...    30   2.0  
BT001342-1|AAN71097.1| 1171|Drosophila melanogaster AT22944p pro...    30   2.0  
AY060669-1|AAL28217.1| 1045|Drosophila melanogaster GH09832p pro...    30   2.0  
AE013599-3417|AAF46864.1| 1171|Drosophila melanogaster CG4329-PA...    30   2.0  

>AY071401-1|AAL49023.1|  592|Drosophila melanogaster RE48767p
           protein.
          Length = 592

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 22/86 (25%), Positives = 35/86 (40%)
 Frame = -3

Query: 325 IYVYVCAFKMGAIYISNCTYRPICRVPTI*VYGLCCYEMLNAIDYNFRLTLALVVSKFGV 146
           I+    A+K+  +Y        I  V T+ V  +C Y +LNA DY ++ T  +      +
Sbjct: 471 IFTSFWAYKIYYVYGFMLLVFSILTVVTVCVTIVCTYFLLNAEDYRWQWTSFMAAGSTSI 530

Query: 145 LNWK*DIRYFEFYENSWNTLLIAFSF 68
             +     YF F    +     AF F
Sbjct: 531 YVYAYSFYYFFFKTKMFGLFQTAFYF 556


>AE014296-978|AAF50762.2|  592|Drosophila melanogaster CG10590-PA
           protein.
          Length = 592

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 22/86 (25%), Positives = 35/86 (40%)
 Frame = -3

Query: 325 IYVYVCAFKMGAIYISNCTYRPICRVPTI*VYGLCCYEMLNAIDYNFRLTLALVVSKFGV 146
           I+    A+K+  +Y        I  V T+ V  +C Y +LNA DY ++ T  +      +
Sbjct: 471 IFTSFWAYKIYYVYGFMLLVFSILTVVTVCVTIVCTYFLLNAEDYRWQWTSFMAAGSTSI 530

Query: 145 LNWK*DIRYFEFYENSWNTLLIAFSF 68
             +     YF F    +     AF F
Sbjct: 531 YVYAYSFYYFFFKTKMFGLFQTAFYF 556


>BT025194-1|ABF17885.1| 1171|Drosophila melanogaster FI01301p
           protein.
          Length = 1171

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/75 (29%), Positives = 34/75 (45%)
 Frame = +3

Query: 123 RISYFQFRTPNFDTTKAKVNLKL*SMALSIS*QHKP*TYIVGTRHIGLYVQLLI*IAPIL 302
           R+S F+F      T    +  +     L+++  HK  T IV T H  +YV +LI +   L
Sbjct: 311 RVSKFKFERKTILTVPTNLYAEHMYQILNLAIDHKQETVIVTTSHCQIYVGILI-VPETL 369

Query: 303 KAHT*TYIYLGLTQH 347
           K     +  LG+  H
Sbjct: 370 KTKQLKFEPLGVLIH 384


>BT016154-1|AAV37039.1| 1171|Drosophila melanogaster AT13664p
           protein.
          Length = 1171

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/75 (29%), Positives = 34/75 (45%)
 Frame = +3

Query: 123 RISYFQFRTPNFDTTKAKVNLKL*SMALSIS*QHKP*TYIVGTRHIGLYVQLLI*IAPIL 302
           R+S F+F      T    +  +     L+++  HK  T IV T H  +YV +LI +   L
Sbjct: 311 RVSKFKFERKTILTVPTNLYAEHMYQILNLAIDHKQETVIVTTSHCQIYVGILI-VPETL 369

Query: 303 KAHT*TYIYLGLTQH 347
           K     +  LG+  H
Sbjct: 370 KTKQLKFEPLGVLIH 384


>BT001342-1|AAN71097.1| 1171|Drosophila melanogaster AT22944p
           protein.
          Length = 1171

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/75 (29%), Positives = 34/75 (45%)
 Frame = +3

Query: 123 RISYFQFRTPNFDTTKAKVNLKL*SMALSIS*QHKP*TYIVGTRHIGLYVQLLI*IAPIL 302
           R+S F+F      T    +  +     L+++  HK  T IV T H  +YV +LI +   L
Sbjct: 311 RVSKFKFERKTILTVPTNLYAEHMYQILNLAIDHKQETVIVTTSHCQIYVGILI-VPETL 369

Query: 303 KAHT*TYIYLGLTQH 347
           K     +  LG+  H
Sbjct: 370 KTKQLKFEPLGVLIH 384


>AY060669-1|AAL28217.1| 1045|Drosophila melanogaster GH09832p
           protein.
          Length = 1045

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/75 (29%), Positives = 34/75 (45%)
 Frame = +3

Query: 123 RISYFQFRTPNFDTTKAKVNLKL*SMALSIS*QHKP*TYIVGTRHIGLYVQLLI*IAPIL 302
           R+S F+F      T    +  +     L+++  HK  T IV T H  +YV +LI +   L
Sbjct: 185 RVSKFKFERKTILTVPTNLYAEHMYQILNLAIDHKQETVIVTTSHCQIYVGILI-VPETL 243

Query: 303 KAHT*TYIYLGLTQH 347
           K     +  LG+  H
Sbjct: 244 KTKQLKFEPLGVLIH 258


>AE013599-3417|AAF46864.1| 1171|Drosophila melanogaster CG4329-PA,
           isoform A protein.
          Length = 1171

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/75 (29%), Positives = 34/75 (45%)
 Frame = +3

Query: 123 RISYFQFRTPNFDTTKAKVNLKL*SMALSIS*QHKP*TYIVGTRHIGLYVQLLI*IAPIL 302
           R+S F+F      T    +  +     L+++  HK  T IV T H  +YV +LI +   L
Sbjct: 311 RVSKFKFERKTILTVPTNLYAEHMYQILNLAIDHKQETVIVTTSHCQIYVGILI-VPETL 369

Query: 303 KAHT*TYIYLGLTQH 347
           K     +  LG+  H
Sbjct: 370 KTKQLKFEPLGVLIH 384


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,565,764
Number of Sequences: 53049
Number of extensions: 472367
Number of successful extensions: 721
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)