BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3719
(725 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051337-1|AAH51337.1| 332|Homo sapiens interleukin 9 receptor ... 30 7.3
>BC051337-1|AAH51337.1| 332|Homo sapiens interleukin 9 receptor
protein.
Length = 332
Score = 30.3 bits (65), Expect = 7.3
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +2
Query: 425 WVFKINIIISHPHKGCHH*RPRNWC--RQSSTHINISLSIKYMCCLHGYQVSSQSDAWFS 598
W+ ++ +H C + C RQ S H+ IS S+ CL G + + + +
Sbjct: 117 WLLFTRLLAAHISASCGAVSAPSCCHLRQCSCHLTISPSLSTTACLGGSRSAWWTRSTCP 176
Query: 599 SYNGNIRKNHC 631
NI HC
Sbjct: 177 GDTSNISSGHC 187
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,798,159
Number of Sequences: 237096
Number of extensions: 2260899
Number of successful extensions: 3965
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3956
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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