SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3714
         (511 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U60669-1|AAB03776.1|  104|Homo sapiens 1 alpha,25-dihydroxyvitam...    32   1.0  
L13286-1|AAA62379.1|  513|Homo sapiens 1,25-dihydroxyvitamin D3 ...    32   1.0  
BC109084-1|AAI09085.1|  448|Homo sapiens CYP24A1 protein protein.      31   1.8  
BC109083-1|AAI09084.1|  448|Homo sapiens CYP24A1 protein protein.      31   1.8  
AL138805-3|CAM27343.1|  448|Homo sapiens cytochrome P450, family...    31   1.8  
AL138805-2|CAB91829.1|  514|Homo sapiens cytochrome P450, family...    31   1.8  
BC041706-1|AAH41706.1| 1863|Homo sapiens DENN/MADD domain contai...    29   7.1  
BC028057-1|AAH28057.1|  933|Homo sapiens DENND4A protein protein.      29   7.1  
AL832602-1|CAD89960.1| 1831|Homo sapiens hypothetical protein pr...    29   7.1  
AK091368-1|BAC03648.1|  928|Homo sapiens protein ( Homo sapiens ...    29   7.1  
AF534403-1|AAQ10514.1| 1865|Homo sapiens c-MYC promoter-binding ...    29   7.1  

>U60669-1|AAB03776.1|  104|Homo sapiens 1 alpha,25-dihydroxyvitamin
           D3 24-hydroxylase protein.
          Length = 104

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 304 TSYNKNQTRKIIICVIT-GGRTSYESARVGPTALPISA 414
           T+Y   Q R++ +C +T GG T   +A  GPT+ P+ A
Sbjct: 31  TAYTSPQPREVPVCPLTAGGETQNAAALPGPTSWPLLA 68


>L13286-1|AAA62379.1|  513|Homo sapiens 1,25-dihydroxyvitamin D3
           24-hydroxylase protein.
          Length = 513

 Score = 32.3 bits (70), Expect = 1.0
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 304 TSYNKNQTRKIIICVIT-GGRTSYESARVGPTALPISA 414
           T+Y   Q R++ +C +T GG T   +A  GPT+ P+ A
Sbjct: 31  TAYTSPQPREVPVCPLTAGGETQNAAALPGPTSWPLLA 68


>BC109084-1|AAI09085.1|  448|Homo sapiens CYP24A1 protein protein.
          Length = 448

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 304 TSYNKNQTRKIIICVIT-GGRTSYESARVGPTALPI 408
           T+Y   Q R++ +C +T GG T   +A  GPT+ P+
Sbjct: 31  TAYTSPQPREVPVCPLTAGGETQNAAALPGPTSWPL 66


>BC109083-1|AAI09084.1|  448|Homo sapiens CYP24A1 protein protein.
          Length = 448

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 304 TSYNKNQTRKIIICVIT-GGRTSYESARVGPTALPI 408
           T+Y   Q R++ +C +T GG T   +A  GPT+ P+
Sbjct: 31  TAYTSPQPREVPVCPLTAGGETQNAAALPGPTSWPL 66


>AL138805-3|CAM27343.1|  448|Homo sapiens cytochrome P450, family
           24, subfamily A, polypeptide 1 protein.
          Length = 448

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 304 TSYNKNQTRKIIICVIT-GGRTSYESARVGPTALPI 408
           T+Y   Q R++ +C +T GG T   +A  GPT+ P+
Sbjct: 31  TAYTSPQPREVPVCPLTAGGETQNAAALPGPTSWPL 66


>AL138805-2|CAB91829.1|  514|Homo sapiens cytochrome P450, family
           24, subfamily A, polypeptide 1 protein.
          Length = 514

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 304 TSYNKNQTRKIIICVIT-GGRTSYESARVGPTALPI 408
           T+Y   Q R++ +C +T GG T   +A  GPT+ P+
Sbjct: 31  TAYTSPQPREVPVCPLTAGGETQNAAALPGPTSWPL 66


>BC041706-1|AAH41706.1| 1863|Homo sapiens DENN/MADD domain
           containing 4A protein.
          Length = 1863

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 488 GTGPPLEYSYNGCPTLQ 438
           G  PPL+YSYNG P L+
Sbjct: 688 GEEPPLQYSYNGFPVLR 704


>BC028057-1|AAH28057.1|  933|Homo sapiens DENND4A protein protein.
          Length = 933

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 488 GTGPPLEYSYNGCPTLQ 438
           G  PPL+YSYNG P L+
Sbjct: 688 GEEPPLQYSYNGFPVLR 704


>AL832602-1|CAD89960.1| 1831|Homo sapiens hypothetical protein
           protein.
          Length = 1831

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 488 GTGPPLEYSYNGCPTLQ 438
           G  PPL+YSYNG P L+
Sbjct: 656 GEEPPLQYSYNGFPVLR 672


>AK091368-1|BAC03648.1|  928|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34049 fis, clone FCBBF3000110, weakly similar to
           CRAG protein. ).
          Length = 928

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 488 GTGPPLEYSYNGCPTLQ 438
           G  PPL+YSYNG P L+
Sbjct: 688 GEEPPLQYSYNGFPVLR 704


>AF534403-1|AAQ10514.1| 1865|Homo sapiens c-MYC promoter-binding
           protein IRLB protein.
          Length = 1865

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -3

Query: 488 GTGPPLEYSYNGCPTLQ 438
           G  PPL+YSYNG P L+
Sbjct: 688 GEEPPLQYSYNGFPVLR 704


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,208,710
Number of Sequences: 237096
Number of extensions: 1844478
Number of successful extensions: 2639
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2639
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -