Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3714
(511 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.1
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 3.2
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 3.2
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 3.2
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 3.2
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 3.2
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 3.2
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 3.2
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 3.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 3.2
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 4.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 4.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 4.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 4.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 4.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 4.2
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 4.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 4.2
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 4.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 4.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 4.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 4.2
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 9.8
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 9.8
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 9.8
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 242 LVPACGIPTPVHRF 201
L PA G P PVHR+
Sbjct: 233 LCPAQGFPVPVHRW 246
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 97 YKKLQYYNINYIEQIPVPV 115
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 97 YKKLQYYNINYIEQIPVPV 115
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 97 YKKLQYYNINYIEQIPVPV 115
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 97 YKKLQYYNINYIEQIPVPV 115
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 318 YKKLQYYNINYIEQIPVPV 336
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 329 YKKLQYYNINYIEQIPVPV 347
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 329 YKKLQYYNINYIEQIPVPV 347
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 318 YKKLQYYNINYIEQIPVPV 336
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 330 YKKLQYYNINYIEQIPVPV 348
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 109 YKKLQYYNIINIEQIPVPV 127
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I V V
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I + V
Sbjct: 107 YKKLQYYNINYIEQIPIPV 125
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I + V
Sbjct: 107 YKKLQYYNINYIEQIPIPV 125
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I + V
Sbjct: 107 YKKLQYYNINYIEQIPIPV 125
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 4.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +2
Query: 110 YKSIKFYNIRRLRKIEVVV 166
YK +++YNI + +I + V
Sbjct: 107 YKKLQYYNINYIEQIPIPV 125
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 20.6 bits (41), Expect = 9.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 178 YPLGHDDFYFTKTTNIIKFN 119
YPL +YF+ T N I +N
Sbjct: 298 YPLTGCLYYFSTTINPILYN 317
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 20.6 bits (41), Expect = 9.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 260 RISFEKLVPACGIPTPVHRFNTNAL 186
R S E +PA G+P R++ A+
Sbjct: 436 RFSGEYEIPAHGLPPSATRYDLGAV 460
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.6 bits (41), Expect = 9.8
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -2
Query: 477 PPRV*LQRLPYPSNRNALLLHGRNRQGGGTY 385
PPR +L P + + ++R+G TY
Sbjct: 429 PPRSKKNKLKKPRQGDGAAVKRKSREGSTTY 459
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,100
Number of Sequences: 438
Number of extensions: 3739
Number of successful extensions: 25
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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