Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3711
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023816-6|CAA19435.1|  341|Caenorhabditis elegans Hypothetical ...    30   1.8  
AL022274-3|CAA18359.1|  341|Caenorhabditis elegans Hypothetical ...    30   1.8  
AL023837-3|CAB63348.2|  283|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z74475-6|CAA98961.1|  299|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AL023811-2|CAA19423.1|  299|Caenorhabditis elegans Hypothetical ...    28   5.4  

>AL023816-6|CAA19435.1|  341|Caenorhabditis elegans Hypothetical
           protein T05G11.7 protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -2

Query: 223 EGTPFWP*YTLVLIIITENNTIYKSSIYSLIFFF 122
           EG PFW    L+L  IT    +Y   I S+I FF
Sbjct: 4   EGLPFWYTVCLILDEITHYQQLYLEPILSIIGFF 37


>AL022274-3|CAA18359.1|  341|Caenorhabditis elegans Hypothetical
           protein T05G11.7 protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -2

Query: 223 EGTPFWP*YTLVLIIITENNTIYKSSIYSLIFFF 122
           EG PFW    L+L  IT    +Y   I S+I FF
Sbjct: 4   EGLPFWYTVCLILDEITHYQQLYLEPILSIIGFF 37


>AL023837-3|CAB63348.2|  283|Caenorhabditis elegans Hypothetical
           protein Y37H2C.4 protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = -2

Query: 199 YTLVLIIITENNTIYKSSIYSLIFFFFCKATFPNINKQIRTVSFVRYRWLYVKPML 32
           + + L+++T  ++ Y SS+      F  +    NIN   + +S V+  +LY+ P+L
Sbjct: 42  HDITLVLLTVYSSCYGSSMSVFACHFIYRYGAVNINFMQKYISGVKQGFLYLAPIL 97


>Z74475-6|CAA98961.1|  299|Caenorhabditis elegans Hypothetical
           protein C51F7.2 protein.
          Length = 299

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 229 VVEGTPFWP*YTLVLIIITENNTIYKSSIYSLIFF 125
           V+ G P    Y    I+I +NN ++ SS Y +  F
Sbjct: 12  VIYGIPSVALYITTCIVIIKNNKLFDSSFYQIFMF 46


>AL023811-2|CAA19423.1|  299|Caenorhabditis elegans Hypothetical
           protein C51F7.2 protein.
          Length = 299

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 229 VVEGTPFWP*YTLVLIIITENNTIYKSSIYSLIFF 125
           V+ G P    Y    I+I +NN ++ SS Y +  F
Sbjct: 12  VIYGIPSVALYITTCIVIIKNNKLFDSSFYQIFMF 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,258,842
Number of Sequences: 27780
Number of extensions: 175692
Number of successful extensions: 314
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)