Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3710
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0759 + 6894556-6894628,6894653-6894738,6895039-6895121,689...    29   2.4  
03_01_0542 + 4071906-4072241,4073093-4073184,4073275-4073317,407...    29   4.2  

>12_01_0759 +
           6894556-6894628,6894653-6894738,6895039-6895121,
           6895278-6895650
          Length = 204

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
 Frame = +3

Query: 144 KNVVSLFTKMARMEGYEIFHT---YREYREEV 230
           +N++ + TK  RMEG+ IF +   YR++ EE+
Sbjct: 130 RNLMYIITKRLRMEGFVIFDSIAVYRQFEEEM 161


>03_01_0542 +
           4071906-4072241,4073093-4073184,4073275-4073317,
           4073601-4073720,4073785-4073949,4074042-4074163,
           4074357-4074476,4074645-4074936
          Length = 429

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 27  RALYSWTYMIYAYFIMSVLVPSK*SASWSKHLYII 131
           R ++ WT+ ++A F  S+      S  W  HLY +
Sbjct: 164 RGIFGWTFDLHALFFKSIKEQIITSFRWVYHLYFV 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,224,849
Number of Sequences: 37544
Number of extensions: 254248
Number of successful extensions: 444
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)