Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3702
(686 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 40 1e-04
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 36 0.001
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 36 0.002
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 35 0.002
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 32 0.015
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 30 0.060
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 30 0.079
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 29 0.14
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 28 0.24
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 27 0.73
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 27 0.73
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 24 3.9
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 24 3.9
DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein O-fucosylt... 24 5.2
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 23 6.8
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 9.0
AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein. 23 9.0
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 39.5 bits (88), Expect = 1e-04
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Frame = +3
Query: 216 LGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKV---TLYKTCIRPVMT 386
LGV DS + F+ HI V R +LG + R+ RN + +Y +R V+
Sbjct: 847 LGVLLDSSLNFKQHIDDVVARGNQLLG-----VVIRTTNEFRNPMCIKAVYNCIVRSVLE 901
Query: 387 YASVVFAHAARIHLKSFQIIQSRFCRIAVG-APWFVRN 497
Y+ VV++ + + IQ + R A+ PW RN
Sbjct: 902 YSCVVWSPTTASSIARIEAIQRKLTRYALRLLPWQDRN 939
Score = 23.8 bits (49), Expect = 5.2
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -3
Query: 378 RGVCKFCRVSPYF*GTFYFSYISSGRDVLE*RRHGRVP 265
RG+ C ++ F Y + + + R L +HG VP
Sbjct: 618 RGITSLCAIAKVFELVIYKNLLHACRSYLSPYQHGFVP 655
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 36.3 bits (80), Expect = 0.001
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 216 LGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICR-RSKMSLRNKVTLYKTCIRPVMTYA 392
LG+ DSR+ F+ + V +A LG + R + LRN LY +RP++ YA
Sbjct: 776 LGIILDSRLNFKLQLDEVLLKANRTLGFILRFTSIFRDQSFLRN---LYYALVRPLLEYA 832
Query: 393 SVVFAHAARIHLKSFQIIQSRFCRIA 470
S+++ + IQ F R+A
Sbjct: 833 SIIWNPPTIDGCSRIESIQRLFTRVA 858
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 35.5 bits (78), Expect = 0.002
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGVT ++++ PH+K V +RA I ++ R +K L + VM YA
Sbjct: 732 YLGVTLQDKLSWLPHVKEVTERAGKIADATSRLL-RNHSEPRASKAKLLASVSESVMRYA 790
Query: 393 SVVFA 407
+ V++
Sbjct: 791 APVWS 795
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 35.1 bits (77), Expect = 0.002
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLG+ D R+ + HIK V +RA L M+ RS + + T I + YA
Sbjct: 716 YLGIMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNRSGPRSSRRRIIANTIIAGI-RYA 774
Query: 393 SVVFAHAARIHLK 431
S ++A + + +
Sbjct: 775 SSIWAESLKFECR 787
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 32.3 bits (70), Expect = 0.015
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLG+ D R+ + HI+ +RA + L M+ ++ S + + T + V YA
Sbjct: 711 YLGMVLDDRLEYTSHIRYAVERATKLWTTLVRMMPNKAGPSSNVRRVIALTVVAKV-RYA 769
Query: 393 SVVFAHAAR 419
S ++ H R
Sbjct: 770 SPIWCHTLR 778
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 30.3 bits (65), Expect = 0.060
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV +++RPH++ V D+A ++ L ++ S + +K L ++ Y
Sbjct: 742 YLGVMLHDHLSWRPHVEMVADKALRVVRALRGIMRNHSGPQV-SKRKLLAAVAASIIRYG 800
Query: 393 SVVFAHA 413
+ V+ A
Sbjct: 801 APVWTEA 807
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 29.9 bits (64), Expect = 0.079
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGVT +++ PH++ V RA I + ++ R +K L + V+ YA
Sbjct: 799 YLGVTLHDHLSWLPHVREVTTRARKIADAVTRLL-RNHSGPKTSKARLLASVAESVIRYA 857
Query: 393 SVVF 404
+ ++
Sbjct: 858 APIW 861
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 29.1 bits (62), Expect = 0.14
Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVMTY 389
YLGV + +R H+ V ++A+ ++ + ++ S + ++++ Y V+ Y
Sbjct: 792 YLGVQLQDHLKWRDHVTKVSEKASRVVAAVTRLMQNHSGPRTAKSRLLAY--VAESVLRY 849
Query: 390 ASVVFAHAARI 422
A+ V+A A ++
Sbjct: 850 AAPVWAEATQV 860
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 28.3 bits (60), Expect = 0.24
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFI---LGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 383
+LGV +++ PH+ V RA I +GRL P R KMS K L VM
Sbjct: 752 HLGVLVHDHLSWIPHVTAVTQRAVQIAQAVGRLMPN-HRGPKMS---KSRLLAAVADSVM 807
Query: 384 TYASVVFAHA 413
YA+ V+ A
Sbjct: 808 RYAAPVWHEA 817
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 26.6 bits (56), Expect = 0.73
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV ++++PH++ +A ++G + ++ S + K L ++ YA
Sbjct: 739 YLGVQIHDHLSWKPHVELSTAKALRVVGVVTAVMRNHSGPQVA-KRRLLAAVAESIIRYA 797
Query: 393 SVVFAHA 413
+ V++ A
Sbjct: 798 APVWSEA 804
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 26.6 bits (56), Expect = 0.73
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIK 263
YLGV D R++FR H++
Sbjct: 707 YLGVIIDDRLSFRKHVE 723
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 24.2 bits (50), Expect = 3.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFIL 293
YLGV +++ PH+K V +A I+
Sbjct: 747 YLGVRLHYNLSWVPHVKAVIQKATQIV 773
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 24.2 bits (50), Expect = 3.9
Identities = 19/91 (20%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV D++++++ H++ + A + + R K L + + ++ YA
Sbjct: 753 YLGVVIDNQLSWKSHVEYCTTK-ALRTAKALGCLMRNHSGPKCAKRRLLASVVDSILRYA 811
Query: 393 SVVFAHAARIHLKSFQIIQ--SRFCRIAVGA 479
+ V+ H A + + +++Q + C I V +
Sbjct: 812 APVW-HEATKNQECRRMLQRVQKHCAIKVSS 841
>DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein
O-fucosyltransferase 2 protein.
Length = 451
Score = 23.8 bits (49), Expect = 5.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 425 VYAGRVSEHYTCIGHDGAYASF 360
V+ + EH GHDGA A F
Sbjct: 171 VFVDKFEEHVCPKGHDGALAYF 192
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 23.4 bits (48), Expect = 6.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFIL 293
YLGV + +++ PH+K + +A I+
Sbjct: 808 YLGVRVHAHLSWVPHVKEITLKATRIV 834
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.0 bits (47), Expect = 9.0
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = +3
Query: 393 SVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 572
S V H+ R + ++S ++ G + R+ + D K+ + S RH D
Sbjct: 576 SFVVEHSRRDRDRDRDRMRSDSGKVGGGGGGYDRDDYRRTEKDYRGNGKHDKYGSSRHSD 635
Query: 573 KAARHEN 593
++RH +
Sbjct: 636 SSSRHRS 642
>AY578796-1|AAT07301.1| 437|Anopheles gambiae Gbb-60A protein.
Length = 437
Score = 23.0 bits (47), Expect = 9.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 432 ILGVCGPRERTLHLHRS 382
+LG+ GPR HLH S
Sbjct: 68 LLGLPGPRPAVRHLHSS 84
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,241
Number of Sequences: 2352
Number of extensions: 12503
Number of successful extensions: 35
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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