Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3702
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 107 2e-23
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 95 8e-20
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 95 8e-20
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 93 2e-19
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 93 2e-19
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 91 1e-18
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 88 1e-17
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 88 1e-17
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 79 4e-15
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 67 2e-11
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 67 2e-11
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 67 2e-11
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 67 2e-11
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 62 9e-10
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 60 4e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 60 4e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 60 4e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 60 4e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 60 4e-09
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 58 1e-08
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 58 1e-08
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 39 0.007
AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p pro... 31 1.1
AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA... 31 1.1
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 107 bits (256), Expect = 2e-23
Identities = 56/156 (35%), Positives = 84/156 (53%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV D R+TF H+ +R R + + Y ++ RSK+SL NK+T+YK + P Y
Sbjct: 747 YLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYG 806
Query: 393 SVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 572
++ A H+K Q IQ++ R+ G WFVRN LH DL L ++ + S R+ D
Sbjct: 807 CQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHD 866
Query: 573 KAARHENPLIVAAGNYIPDPADRMESSRRRPKHVIS 680
+ RH N L A P R+ +RR+P+ +I+
Sbjct: 867 RLERHRNRLASALNR--SRPPRRL--NRRQPRDLIT 898
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 95.1 bits (226), Expect = 8e-20
Identities = 45/129 (34%), Positives = 73/129 (56%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV D R+T+R HI+ L+ +I RS +SL K LY + ++P+ TY
Sbjct: 738 YLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYG 797
Query: 393 SVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 572
S ++ +A+R ++ Q QSR RI GAPW++RN ++H DL ++ + + + ++ +
Sbjct: 798 SELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNE 857
Query: 573 KAARHENPL 599
K H NPL
Sbjct: 858 KLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 95.1 bits (226), Expect = 8e-20
Identities = 45/129 (34%), Positives = 73/129 (56%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV D R+T+R HI+ L+ +I RS +SL K LY + ++P+ TY
Sbjct: 738 YLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYG 797
Query: 393 SVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 572
S ++ +A+R ++ Q QSR RI GAPW++RN ++H DL ++ + + + ++ +
Sbjct: 798 SELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNE 857
Query: 573 KAARHENPL 599
K H NPL
Sbjct: 858 KLTTHTNPL 866
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 93.5 bits (222), Expect = 2e-19
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLG+T D ++TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 752 YLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYG 811
Query: 393 SVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 572
V+ AA+ HL +I+Q++ R GAPW++R D+ DL + + LQ+ + ++ +
Sbjct: 812 LQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYME 871
Query: 573 KAARHENPLIVAAGNYIPDPAD-RMESSRRRPKH 671
+ H N L G AD R RR +H
Sbjct: 872 RLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRH 905
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 93.5 bits (222), Expect = 2e-19
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLG+T D ++TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 554 YLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYG 613
Query: 393 SVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 572
V+ AA+ HL +I+Q++ R GAPW++R D+ DL + + LQ+ + ++ +
Sbjct: 614 LQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLE 673
Query: 573 KAARHENPLIVAAGNYIPDPAD-RMESSRRRPKH 671
+ H N L G AD R RR +H
Sbjct: 674 RLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRH 707
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 91.1 bits (216), Expect = 1e-18
Identities = 42/129 (32%), Positives = 72/129 (55%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLG+T D R+TF PH+K R + +L ++ R+S M+LR K +Y C+ P+ Y
Sbjct: 753 YLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYG 812
Query: 393 SVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 572
++ AA+ + Q++Q+R R P++VR LH DL+L ++ + + + R+ D
Sbjct: 813 IQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSD 872
Query: 573 KAARHENPL 599
+ RH + L
Sbjct: 873 RLRRHHSIL 881
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/112 (32%), Positives = 66/112 (58%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLG+ FD ++TF+ HI + I+ LYP+I R+SK+S+ NK+ ++KT P++ Y
Sbjct: 772 YLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYG 831
Query: 393 SVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQ 548
S V+ A+ H+K QI Q++ ++ + P++ LH ++ + + +Q
Sbjct: 832 SPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQKIQ 883
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 87.8 bits (208), Expect = 1e-17
Identities = 36/112 (32%), Positives = 66/112 (58%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLG+ FD ++TF+ HI + I+ LYP+I R+SK+S+ NK+ ++KT P++ Y
Sbjct: 720 YLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYG 779
Query: 393 SVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQ 548
S V+ A+ H+K QI Q++ ++ + P++ LH ++ + + +Q
Sbjct: 780 SPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQKIQ 831
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 79.4 bits (187), Expect = 4e-15
Identities = 37/108 (34%), Positives = 65/108 (60%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV D R+T+R HI+ + + L+ +I S +SL +KV LY + ++P+ TY
Sbjct: 740 YLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYG 799
Query: 393 SVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 536
S ++ +A+ ++ Q QS+ R GAPW+VR+ ++ DL++ S++
Sbjct: 800 SQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVT 847
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 67.3 bits (157), Expect = 2e-11
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLG+ D R+TF H+ ++ + +L +I + S + K+ L+K + P+ YA
Sbjct: 810 YLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYA 869
Query: 393 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 569
++ + K Q +++++ R + A + R D+ +++S + AS R+
Sbjct: 870 IAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYA 929
Query: 570 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 662
+ HENPLI + Y P +R+E S+ R
Sbjct: 930 NSLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 67.3 bits (157), Expect = 2e-11
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLG+ D R+TF H+ ++ + +L +I + S + K+ L+K + P+ YA
Sbjct: 810 YLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYA 869
Query: 393 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 569
++ + K Q +++++ R + A + R D+ +++S + AS R+
Sbjct: 870 IAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYA 929
Query: 570 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 662
+ HENPLI + Y P +R+E S+ R
Sbjct: 930 NSLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 67.3 bits (157), Expect = 2e-11
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLG+ D R+TF H+ ++ + +L +I + S + K+ L+K + P+ YA
Sbjct: 810 YLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYA 869
Query: 393 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 569
++ + K Q +++++ R + A + R D+ +++S + AS R+
Sbjct: 870 IAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYA 929
Query: 570 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 662
+ HENPLI + Y P +R+E S+ R
Sbjct: 930 NSLTDHENPLIYDLLINAYKP---NRLELSKNR 959
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 66.9 bits (156), Expect = 2e-11
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLG+ D R+TF H+ ++ + +L +I + S + K+ L+K + P+ YA
Sbjct: 363 YLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYA 422
Query: 393 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 569
++ + K Q +++++ R + A + R D+ +++S + AS R+
Sbjct: 423 IAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQRYA 482
Query: 570 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 662
+ HENPLI + Y P +R+E S+ R
Sbjct: 483 NSLTDHENPLIYDLLINAYKP---NRLELSKNR 512
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 61.7 bits (143), Expect = 9e-10
Identities = 38/153 (24%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGVT DS++T H+ + + + +L ++ RSK+ + K+ + K+ + P+ YA
Sbjct: 811 YLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYA 870
Query: 393 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 569
+ ++ Q+ ++R R A + RN + D ++++ ++ Q A R
Sbjct: 871 IAAWGPLVTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRDLFGVKTVEEFYQQAMHRFS 930
Query: 570 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 662
+ H N + + + +YIP +R+E SR+R
Sbjct: 931 ETIKSHPNIAVRRILSRHYIP---NRLERSRQR 960
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 59.7 bits (138), Expect = 4e-09
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV DS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 683 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 742
Query: 393 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 569
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R
Sbjct: 743 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFS 802
Query: 570 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 662
+ H N + + + +YIP +R+E SR+R
Sbjct: 803 ETTKSHPNVAVRRIFSRHYIP---NRLERSRQR 832
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 59.7 bits (138), Expect = 4e-09
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV DS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Query: 393 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 569
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R
Sbjct: 859 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFS 918
Query: 570 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 662
+ H N + + + +YIP +R+E SR+R
Sbjct: 919 ETTKSHPNVAVRRIFSRHYIP---NRLERSRQR 948
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 59.7 bits (138), Expect = 4e-09
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV DS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Query: 393 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 569
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R
Sbjct: 859 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFS 918
Query: 570 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 662
+ H N + + + +YIP +R+E SR+R
Sbjct: 919 ETTKSHPNVAVRRIFSRHYIP---NRLERSRQR 948
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 59.7 bits (138), Expect = 4e-09
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV DS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 761 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 820
Query: 393 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 569
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R
Sbjct: 821 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFS 880
Query: 570 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 662
+ H N + + + +YIP +R+E SR+R
Sbjct: 881 ETTKSHPNVAVRRIFSRHYIP---NRLERSRQR 910
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 59.7 bits (138), Expect = 4e-09
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV DS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Query: 393 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 569
+ ++ Q+ ++R R A + +N + D ++++ ++ Q A R
Sbjct: 859 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVHRFS 918
Query: 570 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 662
+ H N + + + +YIP +R+E SR+R
Sbjct: 919 ETTKSHPNVAVRRIFSRHYIP---NRLERSRQR 948
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 58.0 bits (134), Expect = 1e-08
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV DS++T H+ + + ++ ++ RRSK+ + K+ + K+ + P+ YA
Sbjct: 14 YLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYA 73
Query: 393 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 569
+ ++ Q+ ++R R A + N + D ++++ ++ Q A R
Sbjct: 74 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALHRFS 133
Query: 570 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 662
+ H N + + +YIP +R+E SR+R
Sbjct: 134 ETIKSHPNIAVRRIFTRHYIP---NRLERSRQR 163
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 58.0 bits (134), Expect = 1e-08
Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Frame = +3
Query: 213 YLGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 392
YLGV DS++T H+ + + ++ ++ RRSK+ + K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYA 858
Query: 393 SVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 569
+ ++ Q+ ++R R A + N + D ++++ ++ Q A R
Sbjct: 859 IAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALHRFS 918
Query: 570 DKAARHENPLI--VAAGNYIPDPADRMESSRRR 662
+ H N + + +YIP +R+E SR+R
Sbjct: 919 ETIKSHPNIAVRRIFTRHYIP---NRLERSRQR 948
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 38.7 bits (86), Expect = 0.007
Identities = 20/88 (22%), Positives = 42/88 (47%)
Frame = +3
Query: 216 LGVTFDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 395
LG+TFD ++ F+ H +T+R + + + + S + ++ + + + + + Y
Sbjct: 749 LGITFDPKLLFKQHCQTLRKQLETRFNIIKFLSSKYSYIHIKTLIDITRALMLSKIDYGL 808
Query: 396 VVFAHAARIHLKSFQIIQSRFCRIAVGA 479
+F A+ HLK Q+ R A+ A
Sbjct: 809 PIFGWCAKSHLKKLQVPYHGAVRRAIHA 836
>AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p
protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 380 DGAYASFVECHLISKG-HFTSPTYHRVET 297
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA
protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 380 DGAYASFVECHLISKG-HFTSPTYHRVET 297
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,793,720
Number of Sequences: 53049
Number of extensions: 577953
Number of successful extensions: 1070
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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