Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3697
(482 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15905-1|CAA34019.1| 337|Drosophila melanogaster protein ( Dros... 31 1.1
AY075314-1|AAL68181.1| 474|Drosophila melanogaster GH04404p pro... 30 1.4
AE014297-1444|AAF54744.1| 474|Drosophila melanogaster CG31358-P... 30 1.4
X15904-1|CAA34018.1| 337|Drosophila melanogaster hairy protein. 30 1.9
AY119633-1|AAM50287.1| 337|Drosophila melanogaster RE40955p pro... 30 1.9
AY055842-1|AAL17776.1| 337|Drosophila melanogaster hairy protein. 30 1.9
AY055841-1|AAL17775.1| 337|Drosophila melanogaster hairy protein. 30 1.9
AY055840-1|AAL17774.1| 337|Drosophila melanogaster hairy protein. 30 1.9
AY055839-1|AAL17773.1| 337|Drosophila melanogaster hairy protein. 30 1.9
AY055838-1|AAL17772.1| 337|Drosophila melanogaster hairy protein. 30 1.9
AY055837-1|AAL17771.1| 337|Drosophila melanogaster hairy protein. 30 1.9
AY055836-1|AAL17770.1| 337|Drosophila melanogaster hairy protein. 30 1.9
AY055835-1|AAL17769.1| 337|Drosophila melanogaster hairy protein. 30 1.9
AY055834-1|AAL17768.1| 337|Drosophila melanogaster hairy protein. 30 1.9
AY055833-1|AAL17767.1| 337|Drosophila melanogaster hairy protein. 30 1.9
AE014296-1505|AAX52752.1| 337|Drosophila melanogaster CG6494-PB... 30 1.9
AE014296-1504|AAF50378.1| 337|Drosophila melanogaster CG6494-PA... 30 1.9
AY069666-1|AAL39811.1| 492|Drosophila melanogaster LD44305p pro... 29 2.5
AE014297-810|AAG22135.1| 492|Drosophila melanogaster CG8223-PA ... 29 2.5
D83701-1|BAA12067.1| 540|Drosophila melanogaster photolyase pro... 29 3.3
BT024934-1|ABE01164.1| 329|Drosophila melanogaster IP16409p pro... 29 3.3
BT010315-1|AAQ23633.1| 1559|Drosophila melanogaster AT27514p pro... 29 3.3
AY089584-1|AAL90322.1| 540|Drosophila melanogaster RE11660p pro... 29 3.3
AY070689-1|AAL48160.1| 329|Drosophila melanogaster RH25118p pro... 29 3.3
AY061193-1|AAL28741.1| 554|Drosophila melanogaster LD15362p pro... 29 3.3
AE014298-2588|AAF48744.2| 554|Drosophila melanogaster CG8316-PA... 29 3.3
AE014296-216|AAN11468.1| 192|Drosophila melanogaster CG9148-PB,... 29 3.3
AE014296-215|AAS64929.1| 329|Drosophila melanogaster CG9148-PC,... 29 3.3
AE014296-214|AAF47468.2| 329|Drosophila melanogaster CG9148-PA,... 29 3.3
AE014134-3257|AAF53904.1| 540|Drosophila melanogaster CG2488-PB... 29 3.3
AE014134-3256|AAN11080.1| 540|Drosophila melanogaster CG2488-PA... 29 3.3
AE013599-1903|AAX52705.1| 1560|Drosophila melanogaster CG8787-PB... 29 3.3
AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA... 29 3.3
AB011261-1|BAA34049.1| 193|Drosophila melanogaster supercoiling... 29 3.3
BT003208-1|AAO24963.1| 478|Drosophila melanogaster SD23764p pro... 29 4.4
AE013599-2746|AAO41351.1| 1674|Drosophila melanogaster CG15086-P... 29 4.4
AE013599-2743|AAF57655.1| 1908|Drosophila melanogaster CG15086-P... 29 4.4
AE013599-1621|AAF58436.2| 478|Drosophila melanogaster CG3884-PA... 29 4.4
AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-P... 28 5.8
AE014297-3965|AAN14079.1| 813|Drosophila melanogaster CG31082-P... 28 5.8
BT011405-1|AAR96197.1| 229|Drosophila melanogaster AT20732p pro... 28 7.7
BT003778-1|AAO41459.1| 278|Drosophila melanogaster RE04224p pro... 28 7.7
AY129436-1|AAM76178.1| 626|Drosophila melanogaster LD03595p pro... 28 7.7
AE014297-3537|AAN13994.1| 229|Drosophila melanogaster CG33340-P... 28 7.7
AE014296-862|AAF47912.1| 707|Drosophila melanogaster CG13722-PA... 28 7.7
AE013599-2458|AAM70875.2| 626|Drosophila melanogaster CG4798-PD... 28 7.7
AE013599-2457|AAF57871.3| 626|Drosophila melanogaster CG4798-PC... 28 7.7
AE013599-2456|AAF57872.3| 626|Drosophila melanogaster CG4798-PB... 28 7.7
AE013599-2441|AAF57885.2| 278|Drosophila melanogaster CG10953-P... 28 7.7
>X15905-1|CAA34019.1| 337|Drosophila melanogaster protein (
Drosophila melanogastermRNA for hairy gene. ).
Length = 337
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPSSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY075314-1|AAL68181.1| 474|Drosophila melanogaster GH04404p
protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = -2
Query: 250 RVSTRTKIPLFPPDPEPVHRCLPPLPRQVY---CFLHPKPSPLRPAKVLRENSTSFPLSR 80
R S+ TK P P P H LPP+P HP P+ + STS P +
Sbjct: 402 RSSSPTKPSSIPIPPRPDHPSLPPVPPHPTLPPIPPHPTLPPIPERPIPPPKSTSTPPEK 461
Query: 79 TEKLSV--KNY 53
K+S KNY
Sbjct: 462 DPKVSKADKNY 472
>AE014297-1444|AAF54744.1| 474|Drosophila melanogaster CG31358-PA
protein.
Length = 474
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Frame = -2
Query: 250 RVSTRTKIPLFPPDPEPVHRCLPPLPRQVY---CFLHPKPSPLRPAKVLRENSTSFPLSR 80
R S+ TK P P P H LPP+P HP P+ + STS P +
Sbjct: 402 RSSSPTKPSSIPIPPRPDHPSLPPVPPHPTLPPIPPHPTLPPIPERPIPPPKSTSTPPEK 461
Query: 79 TEKLSV--KNY 53
K+S KNY
Sbjct: 462 DPKVSKADKNY 472
>X15904-1|CAA34018.1| 337|Drosophila melanogaster hairy protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY119633-1|AAM50287.1| 337|Drosophila melanogaster RE40955p
protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY055842-1|AAL17776.1| 337|Drosophila melanogaster hairy protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY055841-1|AAL17775.1| 337|Drosophila melanogaster hairy protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY055840-1|AAL17774.1| 337|Drosophila melanogaster hairy protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY055839-1|AAL17773.1| 337|Drosophila melanogaster hairy protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY055838-1|AAL17772.1| 337|Drosophila melanogaster hairy protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY055837-1|AAL17771.1| 337|Drosophila melanogaster hairy protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY055836-1|AAL17770.1| 337|Drosophila melanogaster hairy protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY055835-1|AAL17769.1| 337|Drosophila melanogaster hairy protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY055834-1|AAL17768.1| 337|Drosophila melanogaster hairy protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY055833-1|AAL17767.1| 337|Drosophila melanogaster hairy protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AE014296-1505|AAX52752.1| 337|Drosophila melanogaster CG6494-PB,
isoform B protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AE014296-1504|AAF50378.1| 337|Drosophila melanogaster CG6494-PA,
isoform A protein.
Length = 337
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 342 SSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPL 452
SS + SY P S + ++E +QR P EQ+PL
Sbjct: 283 SSSSCSYAPPSPANSSYEPMDIKPSVIQRVPMEQQPL 319
>AY069666-1|AAL39811.1| 492|Drosophila melanogaster LD44305p
protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 133 VAMASDEEN--SIPDVGVEEDSDELALDQEETRESSSA 240
+AMA DE +PD ++D +++ D+EE+ E +A
Sbjct: 112 IAMALDENKVIDVPDEAADDDDEDVDDDEEESAEDGAA 149
>AE014297-810|AAG22135.1| 492|Drosophila melanogaster CG8223-PA
protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 133 VAMASDEEN--SIPDVGVEEDSDELALDQEETRESSSA 240
+AMA DE +PD ++D +++ D+EE+ E +A
Sbjct: 112 IAMALDENKVIDVPDEAADDDDEDVDDDEEESAEDGAA 149
>D83701-1|BAA12067.1| 540|Drosophila melanogaster photolyase
protein.
Length = 540
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +2
Query: 125 WSEWR-WLRMKKTVYLTWEWRKTAMNWLWIRRKQ-GNLRPRAYTPTAYNAL--PSGFRPT 292
W W R+ + + L +W A NW+W+ + R Y+P A+ P G
Sbjct: 381 WISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIR 440
Query: 293 PFLAELAGY 319
++ EL+ Y
Sbjct: 441 KYVPELSKY 449
>BT024934-1|ABE01164.1| 329|Drosophila melanogaster IP16409p
protein.
Length = 329
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 157 FLHPKPSPLRPAKVLRENSTSFPLSRTEKLSVKNYNTD 44
FLHP+ P VLRE T K+SV Y D
Sbjct: 192 FLHPEDHPSMKGVVLRETITDLDKDHDGKISVDEYIGD 229
>BT010315-1|AAQ23633.1| 1559|Drosophila melanogaster AT27514p
protein.
Length = 1559
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 229 SSSACLHADCIQRSAQRLSSNTFPG*TGWVPTTATTAGAARIPRTYQAA 375
+S++C + S S++ G T PTT+++AGA P T AA
Sbjct: 679 TSTSCTSSSSSSASMSSSCSSSNSGSTTTAPTTSSSAGAPTAPLTLAAA 727
>AY089584-1|AAL90322.1| 540|Drosophila melanogaster RE11660p
protein.
Length = 540
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +2
Query: 125 WSEWR-WLRMKKTVYLTWEWRKTAMNWLWIRRKQ-GNLRPRAYTPTAYNAL--PSGFRPT 292
W W R+ + + L +W A NW+W+ + R Y+P A+ P G
Sbjct: 381 WISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIR 440
Query: 293 PFLAELAGY 319
++ EL+ Y
Sbjct: 441 KYVPELSKY 449
>AY070689-1|AAL48160.1| 329|Drosophila melanogaster RH25118p
protein.
Length = 329
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 157 FLHPKPSPLRPAKVLRENSTSFPLSRTEKLSVKNYNTD 44
FLHP+ P VLRE T K+SV Y D
Sbjct: 192 FLHPEDHPSMKGVVLRETITDLDKDHDGKISVDEYIGD 229
>AY061193-1|AAL28741.1| 554|Drosophila melanogaster LD15362p
protein.
Length = 554
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 139 MASDEENSIPDVGVEEDSDELALDQEETRESS 234
++ EE +P+ +EEDSDE+ E+ E S
Sbjct: 314 LSPSEEAGVPNAELEEDSDEMEATDEDFEEIS 345
>AE014298-2588|AAF48744.2| 554|Drosophila melanogaster CG8316-PA
protein.
Length = 554
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 139 MASDEENSIPDVGVEEDSDELALDQEETRESS 234
++ EE +P+ +EEDSDE+ E+ E S
Sbjct: 314 LSPSEEAGVPNAELEEDSDEMEATDEDFEEIS 345
>AE014296-216|AAN11468.1| 192|Drosophila melanogaster CG9148-PB,
isoform B protein.
Length = 192
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 157 FLHPKPSPLRPAKVLRENSTSFPLSRTEKLSVKNYNTD 44
FLHP+ P VLRE T K+SV Y D
Sbjct: 55 FLHPEDHPSMKGVVLRETITDLDKDHDGKISVDEYIGD 92
>AE014296-215|AAS64929.1| 329|Drosophila melanogaster CG9148-PC,
isoform C protein.
Length = 329
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 157 FLHPKPSPLRPAKVLRENSTSFPLSRTEKLSVKNYNTD 44
FLHP+ P VLRE T K+SV Y D
Sbjct: 192 FLHPEDHPSMKGVVLRETITDLDKDHDGKISVDEYIGD 229
>AE014296-214|AAF47468.2| 329|Drosophila melanogaster CG9148-PA,
isoform A protein.
Length = 329
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 157 FLHPKPSPLRPAKVLRENSTSFPLSRTEKLSVKNYNTD 44
FLHP+ P VLRE T K+SV Y D
Sbjct: 192 FLHPEDHPSMKGVVLRETITDLDKDHDGKISVDEYIGD 229
>AE014134-3257|AAF53904.1| 540|Drosophila melanogaster CG2488-PB,
isoform B protein.
Length = 540
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +2
Query: 125 WSEWR-WLRMKKTVYLTWEWRKTAMNWLWIRRKQ-GNLRPRAYTPTAYNAL--PSGFRPT 292
W W R+ + + L +W A NW+W+ + R Y+P A+ P G
Sbjct: 381 WISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIR 440
Query: 293 PFLAELAGY 319
++ EL+ Y
Sbjct: 441 KYVPELSKY 449
>AE014134-3256|AAN11080.1| 540|Drosophila melanogaster CG2488-PA,
isoform A protein.
Length = 540
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +2
Query: 125 WSEWR-WLRMKKTVYLTWEWRKTAMNWLWIRRKQ-GNLRPRAYTPTAYNAL--PSGFRPT 292
W W R+ + + L +W A NW+W+ + R Y+P A+ P G
Sbjct: 381 WISWEEGQRVFEQLLLDQDWALNAGNWMWLSASAFFHQYFRVYSPVAFGKKTDPQGHYIR 440
Query: 293 PFLAELAGY 319
++ EL+ Y
Sbjct: 441 KYVPELSKY 449
>AE013599-1903|AAX52705.1| 1560|Drosophila melanogaster CG8787-PB,
isoform B protein.
Length = 1560
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 229 SSSACLHADCIQRSAQRLSSNTFPG*TGWVPTTATTAGAARIPRTYQAA 375
+S++C + S S++ G T PTT+++AGA P T AA
Sbjct: 680 TSTSCTSSSSSSASMSSSCSSSNSGSTTTAPTTSSSAGAPTAPLTLAAA 728
>AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA,
isoform A protein.
Length = 1669
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 229 SSSACLHADCIQRSAQRLSSNTFPG*TGWVPTTATTAGAARIPRTYQAA 375
+S++C + S S++ G T PTT+++AGA P T AA
Sbjct: 680 TSTSCTSSSSSSASMSSSCSSSNSGSTTTAPTTSSSAGAPTAPLTLAAA 728
>AB011261-1|BAA34049.1| 193|Drosophila melanogaster supercoiling
factor protein.
Length = 193
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 157 FLHPKPSPLRPAKVLRENSTSFPLSRTEKLSVKNYNTD 44
FLHP+ P VLRE T K+SV Y D
Sbjct: 55 FLHPEDHPSMKGVVLRETITDLDKDHDGKISVDEYIGD 92
>BT003208-1|AAO24963.1| 478|Drosophila melanogaster SD23764p
protein.
Length = 478
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -2
Query: 232 KIPLFPPDPEPVHRCLPPLPRQVYCF--LHPKPSPLRP 125
K PL PP P PPLP + Y + L P P RP
Sbjct: 165 KCPLSPPPPPSPPAMAPPLPAKPYPYPDLAAMPFPDRP 202
>AE013599-2746|AAO41351.1| 1674|Drosophila melanogaster CG15086-PD,
isoform D protein.
Length = 1674
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = -2
Query: 274 GQSVVCSRRVSTRTKIPLFPPDPEPVHRCLPPLPRQVYCFLHPKPSPLRPAK 119
G + CS R R+ I PP P P +C P V PK P K
Sbjct: 749 GTAQTCSVRCHARSHIQGPPPPPAPKRKCPAATPPPVCRKPTPKTKPTNTPK 800
>AE013599-2743|AAF57655.1| 1908|Drosophila melanogaster CG15086-PA,
isoform A protein.
Length = 1908
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/52 (32%), Positives = 20/52 (38%)
Frame = -2
Query: 274 GQSVVCSRRVSTRTKIPLFPPDPEPVHRCLPPLPRQVYCFLHPKPSPLRPAK 119
G + CS R R+ I PP P P +C P V PK P K
Sbjct: 749 GTAQTCSVRCHARSHIQGPPPPPAPKRKCPAATPPPVCRKPTPKTKPTNTPK 800
>AE013599-1621|AAF58436.2| 478|Drosophila melanogaster CG3884-PA,
isoform A protein.
Length = 478
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -2
Query: 232 KIPLFPPDPEPVHRCLPPLPRQVYCF--LHPKPSPLRP 125
K PL PP P PPLP + Y + L P P RP
Sbjct: 165 KCPLSPPPPPSPPAMAPPLPAKPYPYPDLAAMPFPDRP 202
>AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-PA
protein.
Length = 1373
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 130 RPAKVLRENSTSFPLSRTEKLSVKNYNT 47
+PAK L ENS+S S +S +N NT
Sbjct: 222 KPAKWLNENSSSSSSSNNNNISCRNNNT 249
>AE014297-3965|AAN14079.1| 813|Drosophila melanogaster CG31082-PA
protein.
Length = 813
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 13/63 (20%)
Frame = -2
Query: 250 RVSTRTKI--PLFPPDPEPVH-RCLPPLP---------RQVYC-FLHPKPSPLRPAKVLR 110
RVS++TK P P P PV+ LP LP +Y L P PS LRP + +
Sbjct: 348 RVSSKTKPSRPRESPPPPPVNFATLPKLPSTPTLREAEESIYMEALPPTPSQLRPHEFVH 407
Query: 109 ENS 101
ENS
Sbjct: 408 ENS 410
>BT011405-1|AAR96197.1| 229|Drosophila melanogaster AT20732p
protein.
Length = 229
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = -2
Query: 184 PPL---PRQVYCFLHPKPSPLRPAKVLRENSTSFP 89
PP+ P+++ CF KP+P++ K + ST+ P
Sbjct: 109 PPIQIKPKKICCFAKAKPAPIKRRKPSAKPSTACP 143
>BT003778-1|AAO41459.1| 278|Drosophila melanogaster RE04224p
protein.
Length = 278
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 226 PLFPPDPEPVHRCLPPLPRQVYCFLH-PKPSPLR-PAKV 116
P+ P P PV +PP P + ++ P P+P+R PA V
Sbjct: 76 PVVIPAPAPVKTYVPPAPISIPAPVYQPAPAPIRIPAPV 114
>AY129436-1|AAM76178.1| 626|Drosophila melanogaster LD03595p
protein.
Length = 626
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 315 GTNNGHNSRSSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPLKYXQQQLQK 479
G N +NS +S N G+ + F A + T+ Q+Q + QQQ Q+
Sbjct: 12 GHNTNNNSINSSNNDVPKGAKANSAFAAASAGLLTIANHQQQQLLQQPHQQQQQQ 66
>AE014297-3537|AAN13994.1| 229|Drosophila melanogaster CG33340-PA
protein.
Length = 229
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = -2
Query: 184 PPL---PRQVYCFLHPKPSPLRPAKVLRENSTSFP 89
PP+ P+++ CF KP+P++ K + ST+ P
Sbjct: 109 PPIQIKPKKICCFAKAKPAPIKRRKPSAKPSTACP 143
>AE014296-862|AAF47912.1| 707|Drosophila melanogaster CG13722-PA
protein.
Length = 707
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 235 TKIPLFPPDPEPVHRCLPPLPRQVYCFLHPKPS-PLRP 125
T P PP P P + LPP P+ + +PKP+ P P
Sbjct: 200 TTTPAPPPPPPPTKKYLPP-PQVKQGYDYPKPAIPFPP 236
>AE013599-2458|AAM70875.2| 626|Drosophila melanogaster CG4798-PD,
isoform D protein.
Length = 626
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 315 GTNNGHNSRSSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPLKYXQQQLQK 479
G N +NS +S N G+ + F A + T+ Q+Q + QQQ Q+
Sbjct: 12 GHNTNNNSINSSNNDVPKGAKANSAFAAASAGLLTIANHQQQQLLQQPHQQQQQQ 66
>AE013599-2457|AAF57871.3| 626|Drosophila melanogaster CG4798-PC,
isoform C protein.
Length = 626
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 315 GTNNGHNSRSSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPLKYXQQQLQK 479
G N +NS +S N G+ + F A + T+ Q+Q + QQQ Q+
Sbjct: 12 GHNTNNNSINSSNNDVPKGAKANSAFAAASAGLLTIANHQQQQLLQQPHQQQQQQ 66
>AE013599-2456|AAF57872.3| 626|Drosophila melanogaster CG4798-PB,
isoform B protein.
Length = 626
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 315 GTNNGHNSRSSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPLKYXQQQLQK 479
G N +NS +S N G+ + F A + T+ Q+Q + QQQ Q+
Sbjct: 12 GHNTNNNSINSSNNDVPKGAKANSAFAAASAGLLTIANHQQQQLLQQPHQQQQQQ 66
>AE013599-2441|AAF57885.2| 278|Drosophila melanogaster CG10953-PA
protein.
Length = 278
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 226 PLFPPDPEPVHRCLPPLPRQVYCFLH-PKPSPLR-PAKV 116
P+ P P PV +PP P + ++ P P+P+R PA V
Sbjct: 76 PVVIPAPAPVKTYVPPAPISIPAPVYQPAPAPIRIPAPV 114
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,876,072
Number of Sequences: 53049
Number of extensions: 529319
Number of successful extensions: 3225
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3201
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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