Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3697
(482 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 1.8
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 29 1.8
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 29 1.8
Z29443-9|CAA82575.2| 292|Caenorhabditis elegans Hypothetical pr... 28 3.1
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 28 3.1
AB019521-1|BAC66463.1| 292|Caenorhabditis elegans T-box transcr... 28 3.1
AF098992-15|AAN39673.1| 340|Caenorhabditis elegans Hypothetical... 28 4.1
AF098992-14|AAD34669.1| 346|Caenorhabditis elegans Hypothetical... 28 4.1
AF098992-13|AAN39672.1| 385|Caenorhabditis elegans Hypothetical... 28 4.1
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 28 4.1
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 27 5.4
U41557-4|AAA83305.1| 298|Caenorhabditis elegans Hypothetical pr... 27 5.4
AL117203-12|CAB60423.1| 487|Caenorhabditis elegans Hypothetical... 27 5.4
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 27 5.4
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 27 7.1
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81083-5|CAB54248.1| 493|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical pr... 27 7.1
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 7.1
AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical... 27 7.1
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81550-3|CAD44141.1| 548|Caenorhabditis elegans Hypothetical pr... 27 9.4
U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-... 27 9.4
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 27 9.4
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 142 ASDEENSIPDVGVEEDSDELALDQEETRESSS 237
ASD + + +E+SDE + D EE+ ESSS
Sbjct: 410 ASDADEDDDEESSDEESDEESEDSEESEESSS 441
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 306 NWLGTNNGHNSRSSKNTSYLPGSNSKFTFEKPRAPVKTVQRKPQEQRPLKYXQQQLQKV 482
N G G N+ +S NT P NS+F KPR V T+ + + R Q++ ++
Sbjct: 490 NKTGAATGSNAAASPNTPP-PVPNSRFGKVKPRRTVVTINSQQNDARTSPDPIQEMSRM 547
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 142 ASDEENSIPDVGVEEDSDELALDQEETRESSS 237
ASD + + +E+SDE + D EE+ ESSS
Sbjct: 410 ASDADEDDDEESSDEESDEESEDSEESEESSS 441
>Z29443-9|CAA82575.2| 292|Caenorhabditis elegans Hypothetical
protein T07C4.6 protein.
Length = 292
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 315 GTNNGHNSRSSKNTSYLPGSNSKFTFEKPRAP--VKTVQRKPQEQRPLKYXQQQLQK 479
G +G+ SR ++ SY GSNS+ K R+P V +Q P L Y L +
Sbjct: 191 GFRDGNLSRKRRSPSYSDGSNSQSPSPKSRSPPEVAPLQSMPPINPFLFYFPHMLSE 247
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 314 QPVQPGKVLDESRWAERCMQSACKHADE 231
QP +P K++DE RW E Q +H +
Sbjct: 1479 QPREPEKIVDEKRWVELVEQHFEEHLSQ 1506
>AB019521-1|BAC66463.1| 292|Caenorhabditis elegans T-box
transcription factor TBX-9 protein.
Length = 292
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 315 GTNNGHNSRSSKNTSYLPGSNSKFTFEKPRAP--VKTVQRKPQEQRPLKYXQQQLQK 479
G +G+ SR ++ SY GSNS+ K R+P V +Q P L Y L +
Sbjct: 191 GFRDGNLSRKRRSPSYSDGSNSQSPSPKSRSPPEVAPLQSMPPINPFLFYFPHMLSE 247
>AF098992-15|AAN39673.1| 340|Caenorhabditis elegans Hypothetical
protein F53C3.13c protein.
Length = 340
Score = 27.9 bits (59), Expect = 4.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 265 VVCSRRVSTRTKIPLFPPDPEPVHRCLPPLPRQVYCFLHPKPSPLRPAKVLRE 107
V+C V T IPL+ H +PP+ R YC P R +KV R+
Sbjct: 12 VLCDFLVLTLIAIPLYV-----FHEFIPPVRRGFYCDDESIRYPFRDSKVTRQ 59
>AF098992-14|AAD34669.1| 346|Caenorhabditis elegans Hypothetical
protein F53C3.13a protein.
Length = 346
Score = 27.9 bits (59), Expect = 4.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 265 VVCSRRVSTRTKIPLFPPDPEPVHRCLPPLPRQVYCFLHPKPSPLRPAKVLRE 107
V+C V T IPL+ H +PP+ R YC P R +KV R+
Sbjct: 12 VLCDFLVLTLIAIPLYV-----FHEFIPPVRRGFYCDDESIRYPFRDSKVTRQ 59
>AF098992-13|AAN39672.1| 385|Caenorhabditis elegans Hypothetical
protein F53C3.13b protein.
Length = 385
Score = 27.9 bits (59), Expect = 4.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -2
Query: 265 VVCSRRVSTRTKIPLFPPDPEPVHRCLPPLPRQVYCFLHPKPSPLRPAKVLRE 107
V+C V T IPL+ H +PP+ R YC P R +KV R+
Sbjct: 12 VLCDFLVLTLIAIPLYV-----FHEFIPPVRRGFYCDDESIRYPFRDSKVTRQ 59
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 217 PPDPEPVHRC-LPPLPRQVYCFLHPKPSP 134
PP PEP+ C PP P Q Y L P P P
Sbjct: 27 PPCPEPMPVCATPPCPPQ-YAPLPPPPMP 54
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 253 RRVSTRTKIPLFPPDPEPVHRCLPPLP 173
R V+T +K+P F P P+ LPP P
Sbjct: 727 RPVATNSKLPYFIPPPQGYVGPLPPAP 753
>U41557-4|AAA83305.1| 298|Caenorhabditis elegans Hypothetical
protein C50F7.9 protein.
Length = 298
Score = 27.5 bits (58), Expect = 5.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 288 QHLSWLNWLGTNNGHNSRS 344
Q++ WLNWL NN H S
Sbjct: 90 QYILWLNWLVDNNEHMCNS 108
>AL117203-12|CAB60423.1| 487|Caenorhabditis elegans Hypothetical
protein Y48C3A.20 protein.
Length = 487
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 357 SYLPGSNSKFTFEKPRAPVKTVQRKP 434
S LP S+S+FT + + P+K VQ+ P
Sbjct: 349 SILPISDSQFTAAQSKIPLKIVQKTP 374
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 244 STRTKIPLFPPDPEPVHRCLPPLPRQVYCFLHP-KPSPLRPAKVLRENSTSFPLSRTEK 71
ST +K + PP+P P + P+P + P KPSP + EN + P ++ ++
Sbjct: 437 STESKESIVPPEPTPSMQ-ESPVPNAPQVKMEPEKPSPYQQQYNGMENGSGNPYAQQQQ 494
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 139 MASDEENSIPDVGVEEDSDELALDQEE 219
M +EE + G +ED DE+ +D EE
Sbjct: 35 MEDEEEEMEENEGDDEDEDEMVMDDEE 61
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -1
Query: 287 DESRWAERCMQSA-CKHADE 231
DESRW++RC + C H +E
Sbjct: 98 DESRWSKRCSRDEDCTHQEE 117
>Z81083-5|CAB54248.1| 493|Caenorhabditis elegans Hypothetical
protein F44F1.6a protein.
Length = 493
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 399 PRAPVKTVQRKPQEQRPLKYXQQQLQKV 482
P APVKT + QE++ K +++ QKV
Sbjct: 367 PAAPVKTFAVRIQEEKQKKLDEEEQQKV 394
>Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical
protein F44F1.4 protein.
Length = 559
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 399 PRAPVKTVQRKPQEQRPLKYXQQQLQKV 482
P APVKT + QE++ K +++ QKV
Sbjct: 367 PAAPVKTFAVRIQEEKQKKLDEEEQQKV 394
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.1 bits (57), Expect = 7.1
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +1
Query: 283 SSNTFPG*TGWVPTTATTAGAA----RIPRTYQAATAS 384
SS+ P T VPTT TT+GAA I T QA + S
Sbjct: 784 SSSQAPSSTVTVPTTGTTSGAASTTGSITSTQQATSTS 821
>AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical
protein Y54G2A.21 protein.
Length = 967
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 139 SPLRPAKVLRENSTSFPLSRTEKLSVKN 56
+PL V +N+T FP+ +T K ++KN
Sbjct: 589 NPLWKYSVTLDNTTCFPILKTRKATLKN 616
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 26.6 bits (56), Expect = 9.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 247 VSTRTKIPLFPPDPEPVHRCLPPLPRQVYCFLHPKP 140
V + + PL P P+ RC PPLP + P P
Sbjct: 245 VMSPVQSPLTHPPVAPMPRCPPPLPPRTPSMKLPDP 280
>Z81550-3|CAD44141.1| 548|Caenorhabditis elegans Hypothetical
protein F55F3.2b protein.
Length = 548
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 291 HLSWLNWLGTNNGHNSRSSKNTSY 362
H WL W N HN SS NT++
Sbjct: 329 HDEWLGWEMNNVLHNINSSHNTAH 352
>U42847-4|AAF23186.1| 1073|Caenorhabditis elegans
Immunoglobulin-like cell adhesionmolecule family protein
1 protein.
Length = 1073
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 273 PAAFVQHLSWLNWLGTNNGHNSRSSKNTSYLPGSNSKFTFEKPRA 407
P F + +NW NNG +KN L +S+F E A
Sbjct: 53 PEYFDRQKYEINWARYNNGQLRMITKNDKLLAKKHSRFILENDSA 97
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 26.6 bits (56), Expect = 9.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 247 VSTRTKIPLFPPDPEPVHRCLPPLPRQVYCFLHPKP 140
V + + PL P P+ RC PPLP + P P
Sbjct: 245 VMSPVQSPLTHPPVAPMPRCPPPLPPRTPSMKLPDP 280
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,951,161
Number of Sequences: 27780
Number of extensions: 244725
Number of successful extensions: 1057
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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