Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3693
         (676 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   247   5e-66
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    44   1e-04
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    28   5.3  
AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical ...    28   7.0  
AF038609-1|AAO61425.1|  234|Caenorhabditis elegans Hypothetical ...    28   7.0  
AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical ...    28   7.0  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  247 bits (605), Expect = 5e-66
 Identities = 116/191 (60%), Positives = 145/191 (75%)
 Frame = -1

Query: 676 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQA 497
           HI  NVGFVFT+ DL E+R KLLEN+  APA+ GAIAP  V +P  NTG+GPEKTSFFQA
Sbjct: 81  HIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQA 140

Query: 496 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLFNMLNISPFSYGLVVKQVYDSGTIFA 317
           L IPTKI++GTIEI+NDVH++K GDKVGASE+ L NML ++PFSYGLVV+QVYD GT++ 
Sbjct: 141 LQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYT 200

Query: 316 PEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXX 137
           PE+LD+  E+LR +F +GV NVA++SLA+ YPT+AS  HS+ANG +N+L           
Sbjct: 201 PEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFK 260

Query: 136 XXXXIKEFIKD 104
               IK FI D
Sbjct: 261 EAETIKAFIAD 271


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
 Frame = -1

Query: 673 IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKTSFFQA 497
           +KG  G +FT     EV  +  E   +  AR G +A  +VV+P    +          + 
Sbjct: 97  LKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRK 156

Query: 496 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLFNMLNISPFSYGLVVK 347
           L +PTK+ KG I +     + K G+ +   +A +     +    + L+ K
Sbjct: 157 LGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLIFK 206


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 552 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 662
           TT      P  AG WT+ +N ++R  TR P    +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227


>AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical
           protein C54E4.2a protein.
          Length = 226

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = -3

Query: 578 WCHCPIVSG---HSRPQHRPRSREDLFFPGSFYPYQDFKGYY 462
           WC C   S    H  P H+ +   D    G F P  D +G+Y
Sbjct: 134 WCDCFTFSDDLRHEPPCHKAKHDVDPHLLGVFLPRCDLEGFY 175


>AF038609-1|AAO61425.1|  234|Caenorhabditis elegans Hypothetical
           protein C54E4.2b protein.
          Length = 234

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = -3

Query: 578 WCHCPIVSG---HSRPQHRPRSREDLFFPGSFYPYQDFKGYY 462
           WC C   S    H  P H+ +   D    G F P  D +G+Y
Sbjct: 142 WCDCFTFSDDLRHEPPCHKAKHDVDPHLLGVFLPRCDLEGFY 183


>AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical
           protein Y67D8B.2 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -1

Query: 613 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 464
           +L   +Q  A   A+  L+  +P   TGL P +   FQAL  P  I+  T
Sbjct: 42  VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,519,680
Number of Sequences: 27780
Number of extensions: 316437
Number of successful extensions: 915
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)