Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3693
         (676 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    26   0.29 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    26   0.29 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.5  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   4.7  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   6.1  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   8.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.1  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   8.1  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 427 GDKVGASEATLFNMLNISPFSYGLVVKQVYDSGTIFAP 314
           G+  G S  +L     ISP + GLV + +  SGT+ AP
Sbjct: 251 GESAGGSSVSLHL---ISPVTRGLVRRGILQSGTLNAP 285


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 427 GDKVGASEATLFNMLNISPFSYGLVVKQVYDSGTIFAP 314
           G+  G S  +L     ISP + GLV + +  SGT+ AP
Sbjct: 251 GESAGGSSVSLHL---ISPVTRGLVRRGILQSGTLNAP 285


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +3

Query: 438 MCTSLMISIVPFEILVGIERAWKKEVFSGPRPVLWAGMTTD 560
           +C   ++ +  +  L      WK     GP+PV + G T D
Sbjct: 8   LCGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKD 48


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 101 IKVRCSCCRGGTVRRR 54
           +++ C+CC G  VRRR
Sbjct: 402 VRILCACCPG-RVRRR 416


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 185 TIGNGMRG*SNSWVTNSQRKSSYISNSSLELGTEIF 292
           T+ NG+ G + S VTN+   S  +S+    + TE F
Sbjct: 251 TVKNGIYGIALSPVTNNLYYSPLLSHGLYYVDTEQF 286


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 345 CLTTRPYENGEMFNMLKRVA 404
           CL  R Y N E+   +KR+A
Sbjct: 345 CLQFREYLNNELGPAVKRIA 364


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 425 TGLQDVYIVDDFN 463
           TG+ D+++ DD N
Sbjct: 114 TGISDLFVFDDLN 126


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 580 DELELGLCSPTVCHGPQR 633
           D +E G+  PT C G  +
Sbjct: 361 DAVEYGIIGPTTCMGDHK 378


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,959
Number of Sequences: 438
Number of extensions: 3866
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)