Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3691
(668 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1312 + 35642687-35642923,35643712-35643831,35644468-356445... 136 1e-32
02_01_0073 - 509377-509425,510200-510270,510420-510539,510684-51... 125 4e-29
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 119 2e-27
03_04_0161 + 17838466-17838551,17842379-17842445,17842537-178426... 109 3e-24
03_02_0981 + 12917195-12917572,12917661-12917818,12918732-129187... 88 5e-18
03_03_0206 + 15447054-15447181,15448243-15448298,15448373-154485... 36 0.029
12_01_0707 - 6133561-6133947 32 0.48
01_01_0063 + 508387-509112 30 1.5
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 29 2.5
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 29 3.3
01_06_0878 - 32669790-32669846,32670206-32670299,32670384-326704... 29 3.3
05_05_0217 + 23366436-23367005 28 7.7
>02_05_1312 + 35642687-35642923,35643712-35643831,35644468-35644534,
35644673-35644694,35645053-35645152,35645282-35645414,
35645483-35645517,35645708-35646409,35646789-35647121,
35647337-35647601,35647665-35647999,35648105-35648177,
35648271-35648356,35648479-35648598,35648674-35648741,
35648825-35648882
Length = 917
Score = 136 bits (329), Expect = 1e-32
Identities = 69/145 (47%), Positives = 92/145 (63%), Gaps = 4/145 (2%)
Frame = +2
Query: 11 ALWHIYAAKDADKIRDFLVR-AELDRGARPRPQHD---PVHDQTWYLDAALRERLYREYG 178
ALW I+ +D++K++DFL + A R P P+HDQ +YL A + +L EYG
Sbjct: 749 ALWDIFRREDSEKLQDFLRKHAPEFRHIHCNPVKQVIHPIHDQAFYLTAEHKRKLKEEYG 808
Query: 179 VEGYAILQCPGDAVFVPAGAPHQVRNLLDCIKVAEDFVSPENVSRCFELAQQFRQLSRQH 358
VE + Q G+AV +PAG PHQVRNL CIKVA DFVSPENV C L ++FR+L H
Sbjct: 809 VEPWTFEQKLGEAVLIPAGCPHQVRNLKSCIKVALDFVSPENVGECVRLTKEFRRLPSSH 868
Query: 359 SNKEDKLQIKNIVYHAVKDSLCCLE 433
KEDKL+IK + +HA+ + L L+
Sbjct: 869 RAKEDKLEIKKMAFHALNEVLNFLD 893
>02_01_0073 - 509377-509425,510200-510270,510420-510539,510684-510769,
510843-510915,510996-511718,513752-514081,514124-514210,
514494-515250,515336-515399,515477-515609,515702-515801,
515952-516088,516195-516341,516428-516478,517083-517148
Length = 997
Score = 125 bits (301), Expect = 4e-29
Identities = 62/141 (43%), Positives = 87/141 (61%), Gaps = 4/141 (2%)
Frame = +2
Query: 11 ALWHIYAAKDADKIRDFLVR-AELDRGAR---PRPQHDPVHDQTWYLDAALRERLYREYG 178
ALW I+ +D K+ D+L++ AE R + P+HDQ +YL + +L E+G
Sbjct: 831 ALWDIFRREDVSKLHDYLMKHAEEFRHYNYETVKQVSHPIHDQCFYLTNEHKRKLKEEHG 890
Query: 179 VEGYAILQCPGDAVFVPAGAPHQVRNLLDCIKVAEDFVSPENVSRCFELAQQFRQLSRQH 358
+E + Q G+AVF+PAG PHQVRNL CIKVA DFVSPENV C L ++FR L + H
Sbjct: 891 IEPWTFEQKLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENVQECIRLTEEFRLLPKGH 950
Query: 359 SNKEDKLQIKNIVYHAVKDSL 421
EDKL++K I +A+ ++
Sbjct: 951 RVNEDKLEVKKIALYALDQAI 971
>09_03_0218 + 13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 119 bits (286), Expect = 2e-27
Identities = 56/131 (42%), Positives = 82/131 (62%), Gaps = 4/131 (3%)
Frame = +2
Query: 11 ALWHIYAAKDADKIRDFLVRAELDRG----ARPRPQHDPVHDQTWYLDAALRERLYREYG 178
ALW I+ +D K++ +L + + + + +PVHD+T+YL + +L E+G
Sbjct: 754 ALWDIFRREDVPKLKLYLDKHSKEFRHIYCSAVQKVCNPVHDETFYLTEEHKRKLKEEHG 813
Query: 179 VEGYAILQCPGDAVFVPAGAPHQVRNLLDCIKVAEDFVSPENVSRCFELAQQFRQLSRQH 358
+E + +Q G+AVF+PAG PHQVRNL C K+A DFVSPENV C L + FR+L + H
Sbjct: 814 IEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKIALDFVSPENVKECLSLTEDFRRLPKNH 873
Query: 359 SNKEDKLQIKN 391
KEDKL++ N
Sbjct: 874 RAKEDKLEVSN 884
>03_04_0161 + 17838466-17838551,17842379-17842445,17842537-17842662,
17842756-17842886,17843121-17843220,17843334-17843466,
17843500-17843544,17843545-17843608,17843692-17844469,
17844897-17845229,17845427-17845634,17845733-17845809,
17846168-17846240,17846343-17846413,17846597-17846716,
17846815-17846879,17846974-17847124
Length = 875
Score = 109 bits (261), Expect = 3e-24
Identities = 53/101 (52%), Positives = 67/101 (66%)
Frame = +2
Query: 113 PVHDQTWYLDAALRERLYREYGVEGYAILQCPGDAVFVPAGAPHQVRNLLDCIKVAEDFV 292
P+HDQT+YL + +L E+GVE + Q GDAVF+PAG PHQ CIKVA DFV
Sbjct: 720 PIHDQTFYLTVEHKRKLKEEHGVEPWTFEQKLGDAVFIPAGCPHQ-----SCIKVALDFV 774
Query: 293 SPENVSRCFELAQQFRQLSRQHSNKEDKLQIKNIVYHAVKD 415
SPENV C +L +FR+L H KEDKL+IK I +A+K+
Sbjct: 775 SPENVGECVKLTGEFRRLPSDHRAKEDKLEIKKIALNALKE 815
>03_02_0981 + 12917195-12917572,12917661-12917818,12918732-12918765,
12918942-12919074,12919167-12919221,12919281-12920064,
12920440-12920769,12920788-12920895,12921259-12921678,
12921775-12921847,12922291-12922376,12922873-12922992,
12923086-12923156,12923350-12923449
Length = 949
Score = 88.2 bits (209), Expect = 5e-18
Identities = 44/137 (32%), Positives = 77/137 (56%)
Frame = +2
Query: 11 ALWHIYAAKDADKIRDFLVRAELDRGARPRPQHDPVHDQTWYLDAALRERLYREYGVEGY 190
++W ++ +D K+ ++L A + A +P+++Q+ YL+ + L +YG+E +
Sbjct: 771 SVWDVFRRQDISKLNEYLT-ANWEELAASSQVKNPIYEQSIYLNKYHKRILKDQYGIEPW 829
Query: 191 AILQCPGDAVFVPAGAPHQVRNLLDCIKVAEDFVSPENVSRCFELAQQFRQLSRQHSNKE 370
Q G+AVFVPAG P QV+NL +++A DF+SPE++ +AQ+ R L H K
Sbjct: 830 TFQQHIGEAVFVPAGCPFQVKNLQSTVQLALDFLSPESLGESARMAQEIRCLPNDHDAKL 889
Query: 371 DKLQIKNIVYHAVKDSL 421
L+I I +A ++
Sbjct: 890 KMLEIGKISLYAASSAV 906
>03_03_0206 +
15447054-15447181,15448243-15448298,15448373-15448515,
15448630-15448827,15448901-15449100,15449585-15449684,
15449769-15450350,15450434-15450556,15451028-15451108,
15451188-15451495,15451577-15451816,15452261-15452345,
15452429-15452606,15453053-15453227,15453826-15453982
Length = 917
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 200 QCPGDAVFVPAGAPHQVRNLLDCIKVAEDFVSPENVSR-CFELA 328
Q PG+ +FVP+G H V NL I V ++FV+ N C ++A
Sbjct: 295 QLPGETIFVPSGWWHCVLNLDMTIAVTQNFVNQSNFKHVCLDMA 338
>12_01_0707 - 6133561-6133947
Length = 128
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 147 RCASGCTASTAWRGTPSCSVRGTPCSCRRGRR 242
RC GC AS R S R C CR G+R
Sbjct: 67 RCGGGCAASWVARPAVQASWRPATCGCRGGQR 98
>01_01_0063 + 508387-509112
Length = 241
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 179 VEGYAILQCPGDAVFVPAGAPHQVRNLLDCIKVAEDFVSPENVSRC 316
+E YA+ Q PGDA F PA +P + L + +K AE + E+V RC
Sbjct: 116 LEHYALKQ-PGDATFAPAPSPEE---LDEAMKHAE--AAQEHVLRC 155
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -3
Query: 621 KSHFEYTHTHNWYTIERTRGDTHS-AHHTRPQSYVKCGT*LRSRLRSNAGGVRDPTHSAF 445
+ +++ H ++R + D H H R +S + RS R +A +RD + +
Sbjct: 252 RERYKHERRHRSNPVDRDKVDLHELTHRDRERSSSRS----RSDRRESAHHIRDESRESE 307
Query: 444 ARASSRQHRES 412
R+SS +H+++
Sbjct: 308 RRSSSSRHKDN 318
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -2
Query: 271 DAVQQVTHLMRRPRRHEHGVPRTLQDGVPLHAVLAVQPLAQ 149
D++ Q+ ++ RPR E V + G+P +A L VQP Q
Sbjct: 618 DSLHQLGQILARPRVDEGQVVQPNLAGIPTNAGLQVQPSLQ 658
>01_06_0878 -
32669790-32669846,32670206-32670299,32670384-32670499,
32670786-32671096,32672243-32672364,32672754-32672870,
32672982-32673054,32673416-32673542,32673659-32673727,
32673811-32674170,32674493-32674633
Length = 528
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2
Query: 152 RERLYREYGVEGYAILQCPGDAVFVPAGAPHQVRNLLDCIKVAEDF 289
R R +EY IL C GDA+F+P G HQV + D + +A +F
Sbjct: 271 RARYMKEYSER--VILNC-GDALFIPEGWYHQVDS--DDLTIAINF 311
>05_05_0217 + 23366436-23367005
Length = 189
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 225 CRRGRRIRCVTCWTASRWRRTSCR 296
CR G +RCV W S +CR
Sbjct: 143 CRHGFHVRCVDAWLVSHGSCPTCR 166
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,664,578
Number of Sequences: 37544
Number of extensions: 270811
Number of successful extensions: 960
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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