Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3691
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.86 
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         22   4.6  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   6.1  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   6.1  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 600 HTHNWYTIERTRGDTHSAHHTRPQS 526
           H H  +T+  T G  H  HH + QS
Sbjct: 336 HQHGNHTMGPTMGPPHHHHHHQTQS 360


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 540 CDARCVCRRASVRLCTSCVCECTR 611
           C  RC+ +R     C + VC C +
Sbjct: 81  CAIRCLAQRRKGGSCRNGVCICRK 104


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 499 FEVEIKCGRCSRPDSLGLRESLLEAAQ 419
           ++  I  G C  PDS+  +  + EA Q
Sbjct: 46  YDCFIDAGSCLTPDSVFFKSHITEAFQ 72


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 499 FEVEIKCGRCSRPDSLGLRESLLEAAQ 419
           ++  I  G C  PDS+  +  + EA Q
Sbjct: 46  YDCFIDAGSCLTPDSVFFKSHITEAFQ 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,285
Number of Sequences: 438
Number of extensions: 2693
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)