Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3686
(338 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768... 31 0.23
04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220 30 0.40
01_04_0109 + 16112581-16112934 30 0.40
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 30 0.40
04_04_1602 + 34712748-34713097,34715452-34715605,34715702-34716103 30 0.53
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827... 30 0.53
05_05_0228 + 23454434-23455456,23456151-23456555,23456657-23457004 29 1.2
02_05_0781 + 31715100-31715672 29 1.2
02_03_0093 - 15120951-15121344,15121658-15121953,15122119-151224... 29 1.2
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 28 1.6
07_03_0191 - 14920321-14920511,14920844-14921177 28 1.6
04_01_0081 - 890347-890603,890871-891204 28 1.6
12_01_0366 + 2779754-2779882,2780007-2780047,2780163-2780212,278... 28 2.1
04_04_1330 - 32700333-32700770 27 2.8
11_06_0500 + 24362627-24362828,24363046-24363704,24364958-243653... 27 3.8
10_08_0231 - 16045293-16045309,16045377-16045677,16045764-16046648 27 3.8
09_04_0680 - 19401891-19402049,19402556-19402928,19403385-194034... 27 3.8
08_02_0934 + 22747742-22748644 27 3.8
06_03_0741 - 24016204-24016298,24016408-24016525,24016805-240169... 27 3.8
05_01_0077 + 520761-520929,521164-521435,521530-521566,521743-52... 27 3.8
04_04_0786 - 28052981-28053040,28053123-28053222,28053447-280535... 27 3.8
12_01_0453 - 3572745-3572918,3573370-3573430,3573646-3573783,357... 27 5.0
11_02_0059 - 7883980-7884141,7884423-7884467,7884629-7884715,788... 27 5.0
10_06_0002 + 9382559-9382937,9383008-9383180,9386752-9386901,938... 27 5.0
06_01_1070 + 8750260-8750335,8750432-8751311,8753719-8754646 27 5.0
02_05_0812 + 31942591-31942758,31943415-31943491,31944169-319443... 27 5.0
02_02_0113 + 6914562-6915260 27 5.0
01_06_1081 + 34394971-34395139,34395261-34395310,34396057-34396365 27 5.0
10_08_1047 - 22549376-22551271 26 6.6
09_04_0378 - 17091407-17092369 26 6.6
09_02_0379 - 8210401-8210567,8210944-8213827 26 6.6
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 26 6.6
04_04_0780 + 28029920-28030621 26 6.6
01_05_0489 + 22652479-22653718,22653882-22654063,22654172-226542... 26 6.6
01_01_1001 - 7925858-7926559 26 6.6
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 26 8.7
09_02_0224 - 5984128-5984923,5985667-5986718,5986800-5987776,598... 26 8.7
05_05_0392 + 24629528-24630442 26 8.7
05_03_0635 - 16446805-16447716 26 8.7
04_04_1658 - 35119623-35119754,35121033-35121121,35121205-351215... 26 8.7
03_06_0492 - 34313286-34313405,34313592-34313715,34313925-343139... 26 8.7
03_05_0565 + 25667391-25667696 26 8.7
03_02_0738 - 10824121-10825572 26 8.7
>12_01_0830 -
7678038-7678444,7678996-7680943,7681231-7681983,
7682701-7682824,7683590-7683723
Length = 1121
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = -3
Query: 180 TLTPGVRSPSGVKTRSQ*GGSRGQHYNQTRGATPRTPDRR 61
TLTP RSPS R S G N TRGA+P +RR
Sbjct: 151 TLTPPRRSPSPASRRMS-ATSSGPTLNGTRGASPVKTNRR 189
>04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220
Length = 1053
Score = 30.3 bits (65), Expect = 0.40
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 173 RPASDLRPGSKPGHSRGVPAVNTTTRHAAPPRGRPTDGSS 54
RP R G + G P+ TTRHA P R DG +
Sbjct: 577 RPLPMRRRGGRGGRRLPSPSTRPTTRHALPGEDRSHDGGA 616
>01_04_0109 + 16112581-16112934
Length = 117
Score = 30.3 bits (65), Expect = 0.40
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = -1
Query: 179 LLRPASDLRPGSKPGHSRGVPAVN--TTTRHAAPPRGRPTD-GSSRR*STSVSAIRRPSG 9
+LRP + L P R A + T H + R +PT GS RR SA R+ +
Sbjct: 5 VLRPHNVLLPSPAQRRIRATAATHQRTANNHQSDARTKPTTAGSRRRQGRGSSAARKAAA 64
Query: 8 RP 3
RP
Sbjct: 65 RP 66
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 30.3 bits (65), Expect = 0.40
Identities = 33/109 (30%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Frame = -1
Query: 311 GRTSYEVPAPR-GRAR---YVRLNDLQVLRADRGPKEFRAHPLNDSPALLR-PASDLRPG 147
GR+ P+PR GR+R Y R R+ ++ R + SP R P R
Sbjct: 137 GRSYSRSPSPRRGRSRGRSYSRSRSRSYSRSQSPRRDSRNERRSRSPRDSRSPRGSPRDS 196
Query: 146 SKP-GHSRGVPAVNTTTRHAAPPRGRPTDGSSRR*STSVSAIRRPSGRP 3
P G R + + R PRG P D S R S S R S P
Sbjct: 197 RSPRGSPRDSRSPKGSPRDTQSPRGSPRDSRSPRRSASPPNGRNRSPTP 245
>04_04_1602 + 34712748-34713097,34715452-34715605,34715702-34716103
Length = 301
Score = 29.9 bits (64), Expect = 0.53
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 170 PASDLRPGSKPGHSRGVPAVNTTTRHAAPPRGRPTDGS 57
PAS + G+K G G PA T+ A + +P +GS
Sbjct: 251 PASAAKDGAKDGAKDGTPAPANGTKKPAESKEKPANGS 288
>02_05_0684 - 30880527-30880753,30881952-30882124,30882687-30882754,
30882860-30882973,30883281-30883438,30883516-30883654,
30883851-30883907,30884064-30884140,30884324-30884462,
30884590-30884668,30885047-30885174,30885269-30885352,
30886072-30886191,30886274-30886375,30886470-30886617,
30887404-30887749,30887851-30887968,30888309-30888370,
30888798-30888947,30889049-30889169,30889269-30889319,
30889427-30889567
Length = 933
Score = 29.9 bits (64), Expect = 0.53
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Frame = -3
Query: 258 TQRSAGVESRPRAQGI*GPPTKRLPCTLTPGV--RSPSGVKTRSQ*GGSRGQHY-----N 100
T S+G ES PR G G + + + G RS S +TRS+ SRG+ Y N
Sbjct: 852 TNDSSGAESSPRTSGQSGEDWRSAFDSASNGSVDRSSSHNETRSRSADSRGKRYENGDVN 911
Query: 99 QTRGATPRTPDR 64
+ RTP+R
Sbjct: 912 GGNSGSRRTPNR 923
>05_05_0228 + 23454434-23455456,23456151-23456555,23456657-23457004
Length = 591
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 174 TPGVRSPSGVKTRSQ*GGSRGQHYNQTRGATPRTPDRRVVE 52
+P +RSPSG+K + + G N+ R T R PD ++++
Sbjct: 497 SPMLRSPSGLKNFNAELKAAGYDLNRWRETTRRRPDLQILD 537
>02_05_0781 + 31715100-31715672
Length = 190
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 98 RHAAPPRGRPTDGSSRR*STSVSA 27
RHAA P RP+ +SRR ST+V A
Sbjct: 64 RHAAAPPPRPSASTSRRSSTTVVA 87
>02_03_0093 -
15120951-15121344,15121658-15121953,15122119-15122419,
15123233-15123628,15123883-15124067
Length = 523
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 203 HPLNDSPALLRPASDLRPGSKPGHSRGVPAVNTTTRHAAPPR--GRPTDGSSRR*STS 36
HP + P L S+ +PG P + G+ + +T R PPR G P S R S+S
Sbjct: 405 HP--EGPKLHAITSESQPGQAPVRTGGMRLMTSTGRDNQPPRSSGVPPSPSEWRSSSS 460
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 162 RSPSGVKTRSQ*GGSRGQHYNQTRGATPR 76
+ PS +++R + GSRG+ Y+Q +PR
Sbjct: 122 KKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>07_03_0191 - 14920321-14920511,14920844-14921177
Length = 174
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -2
Query: 187 PLHSYARRPISVRGQNPVTVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRQSL 29
P + R P+ G++ TV + L PDT HP RP + RR+ L
Sbjct: 49 PAQVWWRCPLPASGRHATTVAAL--AALSPDTMTHPLRLRPLPLQMLGRRRCL 99
>04_01_0081 - 890347-890603,890871-891204
Length = 196
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -2
Query: 187 PLHSYARRPISVRGQNPVTVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRQSL 29
P + R P+ G++ TV + L PDT HP RP + RR+ L
Sbjct: 49 PAQVWWRCPLPASGRHATTVAAL--AALSPDTMTHPLRLRPLPLQMLGRRRCL 99
>12_01_0366 +
2779754-2779882,2780007-2780047,2780163-2780212,
2780824-2780968,2781298-2781354,2781448-2781571,
2781798-2782259,2782493-2782564
Length = 359
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -1
Query: 212 FRAHPLNDSPALLRPASDLRPGSKPGHSRGVPAVNTTTRHAAP 84
F A P + S +L+ PAS P + P H A H P
Sbjct: 256 FFAPPSSSSASLVAPASSFMPTASPFHPTSADAHRPAYGHGTP 298
>04_04_1330 - 32700333-32700770
Length = 145
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 168 GVRSPSGVKTRSQ*GGSRGQHYNQTRGATPRTPDRRVVEAI 46
G R G + GG R +H + A+P P+R VV +
Sbjct: 20 GSRRRGGGSDGEELGGGRDEHEGERERASPVEPEREVVGVV 60
>11_06_0500 +
24362627-24362828,24363046-24363704,24364958-24365300,
24366227-24366645
Length = 540
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -2
Query: 169 RRPISVRGQNPVTVGGFPRSTLQPDTRRHPEDARPTGRRGDS 44
RRPI + P+ GGFP + P E + TG R DS
Sbjct: 27 RRPIGAQWGRPIPRGGFPAT---PTPSSSDELSLATGARTDS 65
>10_08_0231 - 16045293-16045309,16045377-16045677,16045764-16046648
Length = 400
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 145 QNPVTVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRQ 35
Q+ V GG P L P HP+ + PTG+ G +R+
Sbjct: 314 QHTVQGGGGPTIRLDP----HPQISNPTGQTGSRKRK 346
>09_04_0680 -
19401891-19402049,19402556-19402928,19403385-19403421,
19403587-19403667,19405215-19405280,19407453-19407948,
19408050-19408283,19408473-19408772,19409241-19409423,
19410412-19410414
Length = 643
Score = 27.1 bits (57), Expect = 3.8
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -3
Query: 126 GGS---RGQHYNQTRGATPRTPDRRVVEAIVDVSLCDTA-AFRPP 4
GGS GQ Q R PRT D V IV V CDT +RPP
Sbjct: 92 GGSDMGNGQTPQQLR--LPRTKDVFVNGVIVKVKYCDTCMLYRPP 134
>08_02_0934 + 22747742-22748644
Length = 300
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 148 GQNPVTVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRQ 35
G+ PV +GG ++ P T A P RR R+
Sbjct: 254 GEEPVVLGGAGSTSFSPSTSSSSSSASPHERRAQPARK 291
>06_03_0741 -
24016204-24016298,24016408-24016525,24016805-24016903,
24016992-24017117,24017200-24017277,24017366-24017554,
24018186-24018338,24018785-24018898,24019576-24019761,
24019845-24019970,24020053-24020248,24020338-24020438,
24020533-24020610,24020707-24020952,24021063-24022253
Length = 1031
Score = 27.1 bits (57), Expect = 3.8
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -1
Query: 209 RAHPLNDSPALLRPASDLRPGSKPGHSRGVPAVNTTTRHAAPPRGRPTDGSSRR*STSVS 30
RA L + L R + S SRG+ + +R APPR P ++ R S S
Sbjct: 3 RARRLANRALLRRLLAAATAESPAAPSRGISTLAKGSRPRAPPRPAPHQYTTGRRPVSAS 62
Query: 29 AIR 21
A++
Sbjct: 63 ALQ 65
>05_01_0077 +
520761-520929,521164-521435,521530-521566,521743-521840,
521979-522040,522324-522447,522688-522807
Length = 293
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 58 DPSVGRPRGGAACLVVVLTAGTPLL*PGFDPGR 156
DP+ P +++LT+ P + PGFDP +
Sbjct: 99 DPASIAPAIDGIDALIILTSAVPKMKPGFDPSK 131
>04_04_0786 -
28052981-28053040,28053123-28053222,28053447-28053574,
28053654-28053821,28053901-28054013,28054135-28054287,
28054385-28054528,28054794-28055529
Length = 533
Score = 27.1 bits (57), Expect = 3.8
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 188 SPALLRPASDL-RPGSKPGHSRGVPAVNTTTRHAAPPRGRPTDGSSRR*STSVSAIRRPS 12
S + RPAS R ++ G G + RH APP RP GSS S + + RR S
Sbjct: 15 SGTMRRPASTAERSKARGGDEPGTWRRPSFPRHGAPPH-RPPTGSS---SAAGALSRRAS 70
Query: 11 G 9
G
Sbjct: 71 G 71
>12_01_0453 -
3572745-3572918,3573370-3573430,3573646-3573783,
3573882-3574003,3574078-3574233,3575337-3575477,
3575643-3576044
Length = 397
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = -1
Query: 182 ALLRPASDLRPGSKPGHSRGVPAVNTTTRHAAPPRGRPTDGSSR 51
A RPAS R G + R V AV R AAPP P D R
Sbjct: 21 ATSRPASPRR-GLSYSYPRRVAAVLRQCRAAAPPPPAPPDAVPR 63
>11_02_0059 -
7883980-7884141,7884423-7884467,7884629-7884715,
7885746-7885874,7885995-7886151,7886248-7886350,
7887050-7887103,7887334-7887451,7888549-7888700,
7890166-7891852
Length = 897
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 131 SRGVPAVNTTTRHAAPPRGRPTDGSS 54
+RG T +HA PPRG P G +
Sbjct: 123 TRGRAETETARKHAPPPRGLPLLGEA 148
>10_06_0002 +
9382559-9382937,9383008-9383180,9386752-9386901,
9387180-9387325,9387416-9387572,9387720-9387778,
9388204-9388360,9389001-9389150,9389280-9389416,
9390071-9390217,9390292-9390393,9390742-9390799,
9391997-9392034,9392124-9392250,9392320-9392493,
9393125-9393256,9393940-9394049,9394752-9394812,
9395036-9395213,9395326-9395531,9395796-9395915,
9396496-9396594,9396983-9397204,9397482-9397621,
9397741-9397852,9398021-9398071,9398151-9398240,
9398397-9398567,9398663-9398815,9399774-9399950,
9400045-9400182,9400295-9400365,9400739-9400838,
9401324-9401380,9401469-9401525,9401619-9401699,
9401782-9401864,9401975-9402110
Length = 1632
Score = 26.6 bits (56), Expect = 5.0
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 136 PGFDPGRRSDAGRKSAGESFSGWALNSLGPRSALNTCRSLSLTYLARPL 282
PG GRRS GR A G G ++A+ CR+ + + PL
Sbjct: 84 PGGWEGRRSGGGRAPARRRGGGETRAVPGRQAAVQRCRAGGEVFCSAPL 132
>06_01_1070 + 8750260-8750335,8750432-8751311,8753719-8754646
Length = 627
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 258 SHIPRAPPRRGDLVG 302
+H PR PPRR +L G
Sbjct: 107 THAPRTPPRRAELTG 121
>02_05_0812 +
31942591-31942758,31943415-31943491,31944169-31944327,
31944559-31944772,31944849-31944935,31945022-31945161,
31945380-31945460,31945948-31946012,31946219-31946394,
31947212-31947342,31947438-31947525,31947671-31947884,
31948206-31948312,31948456-31948953
Length = 734
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 7 RPEGRRIAETDVDYRLDDPSVGRPR 81
+P G R+ E D+DY DD ++ R
Sbjct: 243 KPSGGRLGENDMDYDTDDKTMATLR 267
>02_02_0113 + 6914562-6915260
Length = 232
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 136 PGFDPGRRSDAGRKSAGESFSGWALNSLGPRSALNTCRSLSLTYLA 273
PG G + K+ S +GW GP N RS S +Y A
Sbjct: 71 PGGGGGVQRSGSTKTVASSAAGWGRGGGGPTPGFN-LRSYSASYAA 115
>01_06_1081 + 34394971-34395139,34395261-34395310,34396057-34396365
Length = 175
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 223 PRSALNTCRSLSLTYLARPLGAGTS 297
P+ A + C L+ Y+AR G+GTS
Sbjct: 125 PQLAASACEELARMYVARRRGSGTS 149
>10_08_1047 - 22549376-22551271
Length = 631
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 331 FFFWGPRAEPPTRSPRLGGARGM*DSTICRC 239
FF PR+ PP PRL + + D+T+ RC
Sbjct: 21 FFTTRPRSHPPPPPPRL--SPRLVDATVSRC 49
>09_04_0378 - 17091407-17092369
Length = 320
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 52 LDDPSVGRPRGGAACLVVVLTAGTPLL*PGFDPGRRSDAGRKSAGESFSGW 204
LDDP + GA L + + GFDP R D A ++ SGW
Sbjct: 231 LDDPRMNPMAAGAPSLTKLACERMLVCSAGFDPRRTRDRAYYDAVKA-SGW 280
>09_02_0379 - 8210401-8210567,8210944-8213827
Length = 1016
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +3
Query: 198 WVGPKFLGPAVCS----QHLQIVESHIPRAPPRRGDL 296
W ++L +CS Q+L + +SHI P + GDL
Sbjct: 560 WTQFEYLPRDICSLVNLQYLNLADSHIASLPEKFGDL 596
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = -1
Query: 188 SPALLRPASDLRPGSKPGHSRGVPAVNTTTRHAAPPRGRPTDGSSRR*STSVSAIRRPSG 9
SP + + A ++ P +R ++ + P G G S + S I+RPS
Sbjct: 159 SPIVWKAADEMIGVPVPRKARSASTKRSSHEWSVPGGGSSGGGGSGSVAGDTSQIQRPSS 218
Query: 8 RP 3
RP
Sbjct: 219 RP 220
>04_04_0780 + 28029920-28030621
Length = 233
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 258 SHIPRAPPRRGDLVGGSAL 314
+++ APPRRG+L GG +
Sbjct: 9 AYLTGAPPRRGELAGGGEI 27
>01_05_0489 +
22652479-22653718,22653882-22654063,22654172-22654279,
22654364-22654467,22654570-22654657,22654760-22654870,
22654955-22655020,22656740-22656799,22656869-22657411,
22657646-22657765,22657845-22657964,22659083-22659136,
22659236-22659331,22660580-22660681
Length = 997
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 149 GSKPGHSRGVPAVNTTTRHAAPPRGRPTDGSS 54
G+ GH +GVP V + R A G DGS+
Sbjct: 10 GAGGGHRQGVPRVPPSRRDAGREDGVAEDGST 41
>01_01_1001 - 7925858-7926559
Length = 233
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = -1
Query: 221 PKEFRAHPLND----SPALLRPASDLRPGSKPGHSRGVPAVNTTT 99
P++ P +D SP L PA+D +PG PAV+ T
Sbjct: 35 PRQPETLPFSDTMTASPLFLGPATDTAAADRPGGESSGPAVDFLT 79
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 142 NPVTVGGFPRSTLQPDTRRHPEDARPTGRRGDSR 41
NP V GFP+S + D ++ RRG SR
Sbjct: 311 NPTAVSGFPKSEMYYDDGQYGASDYFDPRRGRSR 344
>09_02_0224 - 5984128-5984923,5985667-5986718,5986800-5987776,
5988427-5989228,5990966-5991016,5992391-5993464,
5994458-5994706
Length = 1666
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 267 PRAPPRRGDLVGGSALGPQ 323
P PP+ G LVGGS PQ
Sbjct: 1200 PATPPKGGPLVGGSLPCPQ 1218
>05_05_0392 + 24629528-24630442
Length = 304
Score = 25.8 bits (54), Expect = 8.7
Identities = 28/96 (29%), Positives = 32/96 (33%)
Frame = -1
Query: 290 PAPRGRARYVRLNDLQVLRADRGPKEFRAHPLNDSPALLRPASDLRPGSKPGHSRGVPAV 111
P R R V +L R DRGP H RP S P R P
Sbjct: 133 PGKPARKRAVVSGELGRARRDRGPAA-AVHGAG------RPGGGRASPSPPPPPRREPGE 185
Query: 110 NTTTRHAAPPRGRPTDGSSRR*STSVSAIRRPSGRP 3
T R +P RP D RR + S A + P
Sbjct: 186 RPTRRSPSPATKRPPD--QRRTAASAGAAAGAASGP 219
>05_03_0635 - 16446805-16447716
Length = 303
Score = 25.8 bits (54), Expect = 8.7
Identities = 19/61 (31%), Positives = 23/61 (37%)
Frame = -1
Query: 206 AHPLNDSPALLRPASDLRPGSKPGHSRGVPAVNTTTRHAAPPRGRPTDGSSRR*STSVSA 27
A P SPA + + P P R A T H APP PT S + +A
Sbjct: 158 AIPAQSSPAAVVAGVPVLPPPPPPAKRLCVAPPTGVEHRAPPPDPPTSLSLSPPGAAAAA 217
Query: 26 I 24
I
Sbjct: 218 I 218
>04_04_1658 - 35119623-35119754,35121033-35121121,35121205-35121599,
35122009-35122091,35122163-35124184,35124859-35124927,
35125050-35125130,35125215-35125308,35125435-35125499,
35125961-35126038,35126115-35126360
Length = 1117
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 112 STLQPDTRRHPEDARPTGRRGDSR 41
ST +PD R+ P D P +RG ++
Sbjct: 976 STARPDCRQSPSDMAPGKQRGKAK 999
>03_06_0492 -
34313286-34313405,34313592-34313715,34313925-34313986,
34314298-34314395,34314478-34314514,34314602-34314873,
34315025-34315028
Length = 238
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 100 VVVLTAGTPLL*PGFDPGR 156
+++LT+ P + PGFDP +
Sbjct: 58 LIILTSAVPKMKPGFDPSK 76
>03_05_0565 + 25667391-25667696
Length = 101
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 98 RHAAPPRGRPTDGSSRR*STSVSAIRRP 15
RH +PP R D +S R S S SA P
Sbjct: 51 RHRSPPLARRADAASPRRSCSGSASAEP 78
>03_02_0738 - 10824121-10825572
Length = 483
Score = 25.8 bits (54), Expect = 8.7
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = -1
Query: 305 TSYEVPAPRGRARYVRLN--DLQVLRADRGPKEFRAHPLNDSPALLRPASDLRPGSKP 138
TS +VP PR R Y R + + + AD P + P + P L P P S P
Sbjct: 48 TSGDVPLPRIRIEYARRDAPTITAVAADTSPPP-PSPPSSSPPPLSFPPPPPPPSSPP 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,472,607
Number of Sequences: 37544
Number of extensions: 289626
Number of successful extensions: 1046
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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