Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3684
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117325-1|AAI17326.1| 1221|Homo sapiens dermatan sulfate epimer...    35   0.34 
AK021539-1|BAB13840.1|  755|Homo sapiens protein ( Homo sapiens ...    35   0.34 
AF480435-1|AAN32895.1| 1222|Homo sapiens NCAG1 protein.                35   0.34 

>BC117325-1|AAI17326.1| 1221|Homo sapiens dermatan sulfate
           epimerase-like protein.
          Length = 1221

 Score = 34.7 bits (76), Expect = 0.34
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
 Frame = +2

Query: 260 FNKFFMYILVYQRIILSF--RFYLIYRNQLFFFLLS*VAELWFLEPIDIYNVNAPP 421
           FN     IL    +IL+F  RFYL +R  + + L+  +A LWF+E +D+++  + P
Sbjct: 781 FNIAVGLILCISLVILTFQWRFYLSFRKLMRWILILVIA-LWFIELLDVWSTCSQP 835


>AK021539-1|BAB13840.1|  755|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11477 fis, clone HEMBA1001746, weakly similar to
           Homo sapiens squamous cell carcinoma antigen recognized
           by T ).
          Length = 755

 Score = 34.7 bits (76), Expect = 0.34
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
 Frame = +2

Query: 260 FNKFFMYILVYQRIILSF--RFYLIYRNQLFFFLLS*VAELWFLEPIDIYNVNAPP 421
           FN     IL    +IL+F  RFYL +R  + + L+  +A LWF+E +D+++  + P
Sbjct: 566 FNIAVGLILCISLVILTFQWRFYLSFRKLMRWILILVIA-LWFIELLDVWSTCSQP 620


>AF480435-1|AAN32895.1| 1222|Homo sapiens NCAG1 protein.
          Length = 1222

 Score = 34.7 bits (76), Expect = 0.34
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
 Frame = +2

Query: 260 FNKFFMYILVYQRIILSF--RFYLIYRNQLFFFLLS*VAELWFLEPIDIYNVNAPP 421
           FN     IL    +IL+F  RFYL +R  + + L+  +A LWF+E +D+++  + P
Sbjct: 782 FNIAVGLILCISLVILTFQWRFYLSFRKLMRWILILVIA-LWFIELLDVWSTCSQP 836


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,455,140
Number of Sequences: 237096
Number of extensions: 1889514
Number of successful extensions: 2386
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2386
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)