Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3676
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical p... 31 0.64
U55372-1|AAA98002.2| 816|Caenorhabditis elegans Hypothetical pr... 31 0.84
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 31 0.84
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 31 0.84
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 31 0.84
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 31 0.84
U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical pr... 30 1.9
U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81543-1|CAB04423.2| 543|Caenorhabditis elegans Hypothetical pr... 29 3.4
EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c pro... 29 4.5
EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b pro... 29 4.5
AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical ... 29 4.5
AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical ... 29 4.5
AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical ... 29 4.5
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 28 7.9
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 28 7.9
>Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 155 LITEEEQIQIRDSFVYDSLQELHEMGCVLVLWSYG 259
++ E Q+ D ++Y LQ H++GCV V + G
Sbjct: 731 ILRREIQLNNGDEYIYRHLQTTHDVGCVQVTYQIG 765
>Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 155 LITEEEQIQIRDSFVYDSLQELHEMGCVLVLWSYG 259
++ E Q+ D ++Y LQ H++GCV V + G
Sbjct: 731 ILRREIQLNNGDEYIYRHLQTTHDVGCVQVTYQIG 765
>U55372-1|AAA98002.2| 816|Caenorhabditis elegans Hypothetical
protein C02G6.2 protein.
Length = 816
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 167 EEQIQIRDSFVYDSLQELHEMGCVLVLWSYG 259
E Q+ D ++Y LQ+ H+ GCV V + +G
Sbjct: 751 EFQLNNGDEYIYRHLQKTHDAGCVEVTFKFG 781
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 167 EEQIQIRDSFVYDSLQELHEMGCVLVLWSYG 259
E Q+ D +VY LQ+ H++GCV V + G
Sbjct: 810 ELQLNNGDEYVYRHLQKTHDVGCVEVTYQIG 840
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 167 EEQIQIRDSFVYDSLQELHEMGCVLVLWSYG 259
E Q+ D +VY LQ+ H++GCV V + G
Sbjct: 751 ELQLNNGDEYVYRHLQKTHDVGCVEVTYQIG 781
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 167 EEQIQIRDSFVYDSLQELHEMGCVLVLWSYG 259
E Q+ D +VY LQ+ H++GCV V + G
Sbjct: 810 ELQLNNGDEYVYRHLQKTHDVGCVEVTYQIG 840
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 167 EEQIQIRDSFVYDSLQELHEMGCVLVLWSYG 259
E Q+ D +VY LQ+ H++GCV V + G
Sbjct: 794 ELQLNNGDEYVYRHLQKTHDVGCVEVTYQIG 824
>U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical
protein C02G6.1 protein.
Length = 980
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 167 EEQIQIRDSFVYDSLQELHEMGCVLVLWSYG 259
E Q+ D ++Y LQ+ H+ GCV V + G
Sbjct: 724 EFQLNNGDEYIYRHLQKTHDAGCVEVTYQIG 754
>U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical
protein W06B4.2 protein.
Length = 521
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1
Query: 662 TLSSCRLSVRDNCASRAQGWG 600
T SSCRL +RD A GWG
Sbjct: 319 TGSSCRLKIRDGSVKGAGGWG 339
>Z81543-1|CAB04423.2| 543|Caenorhabditis elegans Hypothetical
protein F49B2.1 protein.
Length = 543
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 191 SFVYDSLQELHEM-GCVLVLWSYGSRDHVAHSMRDA-DLEGYFDIIISEGSTVREERSDL 364
SF +DS Q E G S+GS D ++ SMR A L DII EG + +S L
Sbjct: 123 SFDHDSEQFCKEFEGLKFRTLSFGSNDPLS-SMRTAISLSPQSDIIQLEGEDMSSAKSLL 181
Query: 365 VQNSHNAIV 391
+QN+ +
Sbjct: 182 LQNTDEVYI 190
>EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c
protein.
Length = 765
Score = 28.7 bits (61), Expect = 4.5
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Frame = +2
Query: 197 VYDSLQELHEMGCVLVLWSYGSRDHVAHSMRDADLEGYFDIIISEGSTV-REERSDLVQN 373
++DSL E+H + C L+L S H + + + I G T RE L Q+
Sbjct: 418 IFDSLDEVHTLTCALLL--LNSDLHGPNMGKKMTARDFITNIAHTGCTFKREMLKTLFQS 475
Query: 374 -SHNAIVDYNLKKRFIENKFVFDIHNHRSDNNIPKSPKIVIKYLS 505
NAI N K N V + P V++Y S
Sbjct: 476 IKDNAISLQNSAKNSTANGSVASTSRRQPQQIYEVDPDSVVEYYS 520
>EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b
protein.
Length = 818
Score = 28.7 bits (61), Expect = 4.5
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Frame = +2
Query: 197 VYDSLQELHEMGCVLVLWSYGSRDHVAHSMRDADLEGYFDIIISEGSTV-REERSDLVQN 373
++DSL E+H + C L+L S H + + + I G T RE L Q+
Sbjct: 471 IFDSLDEVHTLTCALLL--LNSDLHGPNMGKKMTARDFITNIAHTGCTFKREMLKTLFQS 528
Query: 374 -SHNAIVDYNLKKRFIENKFVFDIHNHRSDNNIPKSPKIVIKYLS 505
NAI N K N V + P V++Y S
Sbjct: 529 IKDNAISLQNSAKNSTANGSVASTSRRQPQQIYEVDPDSVVEYYS 573
>AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical
protein Y55D9A.1c protein.
Length = 765
Score = 28.7 bits (61), Expect = 4.5
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Frame = +2
Query: 197 VYDSLQELHEMGCVLVLWSYGSRDHVAHSMRDADLEGYFDIIISEGSTV-REERSDLVQN 373
++DSL E+H + C L+L S H + + + I G T RE L Q+
Sbjct: 418 IFDSLDEVHTLTCALLL--LNSDLHGPNMGKKMTARDFITNIAHTGCTFKREMLKTLFQS 475
Query: 374 -SHNAIVDYNLKKRFIENKFVFDIHNHRSDNNIPKSPKIVIKYLS 505
NAI N K N V + P V++Y S
Sbjct: 476 IKDNAISLQNSAKNSTANGSVASTSRRQPQQIYEVDPDSVVEYYS 520
>AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical
protein Y55D9A.1b protein.
Length = 818
Score = 28.7 bits (61), Expect = 4.5
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Frame = +2
Query: 197 VYDSLQELHEMGCVLVLWSYGSRDHVAHSMRDADLEGYFDIIISEGSTV-REERSDLVQN 373
++DSL E+H + C L+L S H + + + I G T RE L Q+
Sbjct: 471 IFDSLDEVHTLTCALLL--LNSDLHGPNMGKKMTARDFITNIAHTGCTFKREMLKTLFQS 528
Query: 374 -SHNAIVDYNLKKRFIENKFVFDIHNHRSDNNIPKSPKIVIKYLS 505
NAI N K N V + P V++Y S
Sbjct: 529 IKDNAISLQNSAKNSTANGSVASTSRRQPQQIYEVDPDSVVEYYS 573
>AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical
protein Y55D9A.1a protein.
Length = 816
Score = 28.7 bits (61), Expect = 4.5
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Frame = +2
Query: 197 VYDSLQELHEMGCVLVLWSYGSRDHVAHSMRDADLEGYFDIIISEGSTV-REERSDLVQN 373
++DSL E+H + C L+L S H + + + I G T RE L Q+
Sbjct: 469 IFDSLDEVHTLTCALLL--LNSDLHGPNMGKKMTARDFITNIAHTGCTFKREMLKTLFQS 526
Query: 374 -SHNAIVDYNLKKRFIENKFVFDIHNHRSDNNIPKSPKIVIKYLS 505
NAI N K N V + P V++Y S
Sbjct: 527 IKDNAISLQNSAKNSTANGSVASTSRRQPQQIYEVDPDSVVEYYS 571
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 287 RDADLEGYFDIIISEGSTVREERSDLVQNSHNA 385
RDADL YFD ++ + V E+ SDL ++S N+
Sbjct: 836 RDADLWSYFD-EKADAADVLEKSSDLSEDSDNS 867
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 287 RDADLEGYFDIIISEGSTVREERSDLVQNSHNA 385
RDADL YFD ++ + V E+ SDL ++S N+
Sbjct: 836 RDADLWSYFD-EKADAADVLEKSSDLSEDSDNS 867
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,482,369
Number of Sequences: 27780
Number of extensions: 362800
Number of successful extensions: 1043
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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