Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3675
(407 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050632-1|AAH50632.1| 399|Homo sapiens lymphoid enhancer-bindi... 31 1.5
BC040559-1|AAH40559.1| 386|Homo sapiens LEF1 protein protein. 31 1.5
AF294627-1|AAG26886.1| 329|Homo sapiens lymphoid enhancer facto... 31 1.5
AF288571-1|AAG01022.1| 399|Homo sapiens lymphoid enhancer facto... 31 1.5
AF198532-1|AAF13268.1| 399|Homo sapiens lymphoid enhancer bindi... 31 1.5
AY957526-1|AAX57550.1| 128|Homo sapiens anti-oxLDL immunoglobul... 30 3.4
BC027971-1|AAH27971.1| 911|Homo sapiens brevican protein. 29 8.0
BC022938-1|AAH22938.1| 911|Homo sapiens brevican protein. 29 8.0
BC010571-1|AAH10571.1| 911|Homo sapiens brevican protein. 29 8.0
BC009117-1|AAH09117.1| 911|Homo sapiens brevican protein. 29 8.0
AY358372-1|AAQ88738.1| 911|Homo sapiens Brevican Core Pro protein. 29 8.0
AL590666-18|CAI16352.1| 911|Homo sapiens brevican protein. 29 8.0
AL365181-12|CAI13056.1| 911|Homo sapiens brevican protein. 29 8.0
AL137504-1|CAB70776.1| 330|Homo sapiens hypothetical protein pr... 29 8.0
AK129586-1|BAC85187.1| 197|Homo sapiens protein ( Homo sapiens ... 29 8.0
AF228710-1|AAG23134.1| 911|Homo sapiens chondroitin sulfate pro... 29 8.0
AF062197-1|AAC18233.1| 132|Homo sapiens immunoglobulin heavy ch... 29 8.0
AB209570-1|BAD92807.1| 850|Homo sapiens brevican isoform 1 vari... 29 8.0
>BC050632-1|AAH50632.1| 399|Homo sapiens lymphoid enhancer-binding
factor 1 protein.
Length = 399
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 267 HPLRPTYTLGQEG*VPGSHPGCIYDIPPTHKKTRGGARYPIRP 395
HPL P T E PGSHP IP +G +R+P P
Sbjct: 152 HPLTPLITYSDEHFSPGSHPS---HIPSDVNSKQGMSRHPPAP 191
>BC040559-1|AAH40559.1| 386|Homo sapiens LEF1 protein protein.
Length = 386
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 267 HPLRPTYTLGQEG*VPGSHPGCIYDIPPTHKKTRGGARYPIRP 395
HPL P T E PGSHP IP +G +R+P P
Sbjct: 152 HPLTPLITYSDEHFSPGSHPS---HIPSDVNSKQGMSRHPPAP 191
>AF294627-1|AAG26886.1| 329|Homo sapiens lymphoid enhancer factor 1
isoform protein.
Length = 329
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 267 HPLRPTYTLGQEG*VPGSHPGCIYDIPPTHKKTRGGARYPIRP 395
HPL P T E PGSHP IP +G +R+P P
Sbjct: 152 HPLTPLITYSDEHFSPGSHPS---HIPSDVNSKQGMSRHPPAP 191
>AF288571-1|AAG01022.1| 399|Homo sapiens lymphoid enhancer factor-1
protein.
Length = 399
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 267 HPLRPTYTLGQEG*VPGSHPGCIYDIPPTHKKTRGGARYPIRP 395
HPL P T E PGSHP IP +G +R+P P
Sbjct: 152 HPLTPLITYSDEHFSPGSHPS---HIPSDVNSKQGMSRHPPAP 191
>AF198532-1|AAF13268.1| 399|Homo sapiens lymphoid enhancer binding
factor-1 protein.
Length = 399
Score = 31.1 bits (67), Expect = 1.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 267 HPLRPTYTLGQEG*VPGSHPGCIYDIPPTHKKTRGGARYPIRP 395
HPL P T E PGSHP IP +G +R+P P
Sbjct: 152 HPLTPLITYSDEHFSPGSHPS---HIPSDVNSKQGMSRHPPAP 191
>AY957526-1|AAX57550.1| 128|Homo sapiens anti-oxLDL immunoglobulin
heavy chain variable region protein.
Length = 128
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 55 LFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKW 162
L +DDT VYY +R++ +I + L G WF W
Sbjct: 86 LRSDDTAVYYCARSRPII---MGRGVLPPGHWFDLW 118
>BC027971-1|AAH27971.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 28.7 bits (61), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 389 NWVPGPPSSFFMCGRNVI 336
NW PG P S+F+ G N +
Sbjct: 768 NWNPGQPDSYFLSGENCV 785
>BC022938-1|AAH22938.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 28.7 bits (61), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 389 NWVPGPPSSFFMCGRNVI 336
NW PG P S+F+ G N +
Sbjct: 768 NWNPGQPDSYFLSGENCV 785
>BC010571-1|AAH10571.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 28.7 bits (61), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 389 NWVPGPPSSFFMCGRNVI 336
NW PG P S+F+ G N +
Sbjct: 768 NWNPGQPDSYFLSGENCV 785
>BC009117-1|AAH09117.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 28.7 bits (61), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 389 NWVPGPPSSFFMCGRNVI 336
NW PG P S+F+ G N +
Sbjct: 768 NWNPGQPDSYFLSGENCV 785
>AY358372-1|AAQ88738.1| 911|Homo sapiens Brevican Core Pro protein.
Length = 911
Score = 28.7 bits (61), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 389 NWVPGPPSSFFMCGRNVI 336
NW PG P S+F+ G N +
Sbjct: 768 NWNPGQPDSYFLSGENCV 785
>AL590666-18|CAI16352.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 28.7 bits (61), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 389 NWVPGPPSSFFMCGRNVI 336
NW PG P S+F+ G N +
Sbjct: 768 NWNPGQPDSYFLSGENCV 785
>AL365181-12|CAI13056.1| 911|Homo sapiens brevican protein.
Length = 911
Score = 28.7 bits (61), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 389 NWVPGPPSSFFMCGRNVI 336
NW PG P S+F+ G N +
Sbjct: 768 NWNPGQPDSYFLSGENCV 785
>AL137504-1|CAB70776.1| 330|Homo sapiens hypothetical protein
protein.
Length = 330
Score = 28.7 bits (61), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 389 NWVPGPPSSFFMCGRNVI 336
NW PG P S+F+ G N +
Sbjct: 187 NWNPGQPDSYFLSGENCV 204
>AK129586-1|BAC85187.1| 197|Homo sapiens protein ( Homo sapiens
cDNA FLJ26075 fis, clone RCT02312. ).
Length = 197
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 191 QQCYFKGETHRLFPPALGGEISLPQSPSSANLYPGSGRLSTWESPW 328
QQ ++G HR P G E+ P+ P ++ SGR T W
Sbjct: 51 QQHLWRG-LHRHVPQTTGKELRTPRCPQGRSMCVSSGRRGTAPHSW 95
>AF228710-1|AAG23134.1| 911|Homo sapiens chondroitin sulfate
proteoglycan BEHAB/brevican protein.
Length = 911
Score = 28.7 bits (61), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 389 NWVPGPPSSFFMCGRNVI 336
NW PG P S+F+ G N +
Sbjct: 768 NWNPGQPDSYFLSGENCV 785
>AF062197-1|AAC18233.1| 132|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 132
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 55 LFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKW 162
L +DDT VYY +R +S + G WF W
Sbjct: 86 LRSDDTAVYYCARVRSSWGYCSGGSCYGTGNWFDPW 121
>AB209570-1|BAD92807.1| 850|Homo sapiens brevican isoform 1 variant
protein.
Length = 850
Score = 28.7 bits (61), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 389 NWVPGPPSSFFMCGRNVI 336
NW PG P S+F+ G N +
Sbjct: 707 NWNPGQPDSYFLSGENCV 724
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,288,408
Number of Sequences: 237096
Number of extensions: 1598292
Number of successful extensions: 12763
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12763
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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