Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3675
(407 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 75 3e-14
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 75 3e-14
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 55 4e-08
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 52 2e-07
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 52 4e-07
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 50 2e-06
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 50 2e-06
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 48 6e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 48 6e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 48 6e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 48 6e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 48 6e-06
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 47 8e-06
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 47 8e-06
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 43 1e-04
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 43 1e-04
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 43 1e-04
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 43 1e-04
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 43 2e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 43 2e-04
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 33 0.11
BT022556-1|AAY54972.1| 438|Drosophila melanogaster IP11886p pro... 30 1.0
AE014297-579|AAF54047.1| 438|Drosophila melanogaster CG14606-PA... 30 1.0
AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-P... 29 3.1
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 75.4 bits (177), Expect = 3e-14
Identities = 40/119 (33%), Positives = 62/119 (52%)
Frame = +1
Query: 1 LFSLFINDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINP 180
LF++F +DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP
Sbjct: 676 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 735
Query: 181 AKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDASMTFRPHI 357
K+ A+ F + PI WV ++YLG+ D +TF+ HI
Sbjct: 736 NKTNAIFFTK-------RRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKKLTFKYHI 787
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 75.4 bits (177), Expect = 3e-14
Identities = 40/119 (33%), Positives = 62/119 (52%)
Frame = +1
Query: 1 LFSLFINDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINP 180
LF++F +DIP++ L+LFADD VY + + S I + +QS L +++KW+I INP
Sbjct: 624 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 683
Query: 181 AKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDASMTFRPHI 357
K+ A+ F + PI WV ++YLG+ D +TF+ HI
Sbjct: 684 NKTNAIFFTK-------RRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKKLTFKYHI 735
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 54.8 bits (126), Expect = 4e-08
Identities = 39/124 (31%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Frame = +1
Query: 1 LFSLFINDIPRSP-----PTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWR 165
L+ L+ +D+P+ + LA FADD V Y SR + A +Q A +W R+W
Sbjct: 650 LYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWN 709
Query: 166 IDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDASMTF 345
I IN +KS V F P+P KYLGV LD +TF
Sbjct: 710 IGINSSKSNNVCFTLKRRTPPPVYIEEV-----------PVPQPNAAKYLGVLLDRRLTF 758
Query: 346 RPHI 357
H+
Sbjct: 759 SKHV 762
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 52.4 bits (120), Expect = 2e-07
Identities = 41/138 (29%), Positives = 58/138 (42%), Gaps = 8/138 (5%)
Frame = +1
Query: 1 LFSLFINDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFR 156
L+S+F +D+P R PT L+ +ADDT V S + + ++ W
Sbjct: 708 LYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWAD 767
Query: 157 KWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDAS 336
KW I +N AK+ V+F GQ I K YLGVTLD+
Sbjct: 768 KWGISVNAAKTGHVIF--------TLKNDLPTNSMNVKIKGQTIKKESKQSYLGVTLDSK 819
Query: 337 MTFRPHIKKLEGGPGTQF 390
+T H+ KL G T +
Sbjct: 820 LTLSSHVTKLLGKYSTAY 837
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 51.6 bits (118), Expect = 4e-07
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 8/128 (6%)
Frame = +1
Query: 1 LFSLFINDIPRSPPTH--------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFR 156
L+S+F D+P H LA +ADD + YSS + A+ LQ L W +
Sbjct: 651 LYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCK 710
Query: 157 KWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDAS 336
+W + +NP K+ F QP + KYLG+TLD
Sbjct: 711 RWILKVNPQKTINPCF-----TLKTLSPVTAPIELEGVILDQP----SQAKYLGITLDKR 761
Query: 337 MTFRPHIK 360
+TF PH+K
Sbjct: 762 LTFGPHLK 769
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 49.6 bits (113), Expect = 2e-06
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 8/132 (6%)
Frame = +1
Query: 1 LFSLFINDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFR 156
L+S+F +D+P R PT L+ +ADDT V S + + ++ + W
Sbjct: 696 LYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWAD 755
Query: 157 KWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDAS 336
KW I +N AK+ V+F GQ I K YLGV LD+
Sbjct: 756 KWGISVNAAKTGHVIF--------TLKNDLPTSLRTMKIKGQVIKIESKQSYLGVILDSK 807
Query: 337 MTFRPHIKKLEG 372
+T H+ KL G
Sbjct: 808 LTLSSHVTKLMG 819
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/120 (27%), Positives = 51/120 (42%)
Frame = +1
Query: 1 LFSLFINDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINP 180
L+ ++ DIP + ++ FADDT + SR+ +L + + +W WRI +N
Sbjct: 648 LYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNE 707
Query: 181 AKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDASMTFRPHIK 360
K V F P+P +V YLGV LD +T+R HI+
Sbjct: 708 QKCKHVTFTLNRQDCPPLLLNSI-----------PLPKADEVTYLGVHLDRRLTWRRHIE 756
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 47.6 bits (108), Expect = 6e-06
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 8/132 (6%)
Frame = +1
Query: 1 LFSLFINDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFR 156
L+S+F +D+P PT L+ +ADDT V S + + ++ W
Sbjct: 580 LYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWAD 639
Query: 157 KWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDAS 336
KW I +N AK+ V++ GQ I K YLGV LD+
Sbjct: 640 KWGISVNAAKTGHVIY--------TLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSK 691
Query: 337 MTFRPHIKKLEG 372
+T PH+ K+ G
Sbjct: 692 LTLSPHVTKVVG 703
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 47.6 bits (108), Expect = 6e-06
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 8/132 (6%)
Frame = +1
Query: 1 LFSLFINDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFR 156
L+S+F +D+P PT L+ +ADDT V S + + ++ W
Sbjct: 696 LYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWAD 755
Query: 157 KWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDAS 336
KW I +N AK+ V++ GQ I K YLGV LD+
Sbjct: 756 KWGISVNAAKTGHVIY--------TLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSK 807
Query: 337 MTFRPHIKKLEG 372
+T PH+ K+ G
Sbjct: 808 LTLSPHVTKVVG 819
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 47.6 bits (108), Expect = 6e-06
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 8/132 (6%)
Frame = +1
Query: 1 LFSLFINDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFR 156
L+S+F +D+P PT L+ +ADDT V S + + ++ W
Sbjct: 696 LYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWAD 755
Query: 157 KWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDAS 336
KW I +N AK+ V++ GQ I K YLGV LD+
Sbjct: 756 KWGISVNAAKTGHVIY--------TLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSK 807
Query: 337 MTFRPHIKKLEG 372
+T PH+ K+ G
Sbjct: 808 LTLSPHVTKVVG 819
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 47.6 bits (108), Expect = 6e-06
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 8/132 (6%)
Frame = +1
Query: 1 LFSLFINDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFR 156
L+S+F +D+P PT L+ +ADDT V S + + ++ W
Sbjct: 658 LYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWAD 717
Query: 157 KWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDAS 336
KW I +N AK+ V++ GQ I K YLGV LD+
Sbjct: 718 KWGISVNAAKTGHVIY--------TLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSK 769
Query: 337 MTFRPHIKKLEG 372
+T PH+ K+ G
Sbjct: 770 LTLSPHVTKVVG 781
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 47.6 bits (108), Expect = 6e-06
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 8/132 (6%)
Frame = +1
Query: 1 LFSLFINDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFR 156
L+S+F +D+P PT L+ +ADDT V S + + ++ W
Sbjct: 696 LYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWAD 755
Query: 157 KWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDAS 336
KW I +N AK+ V++ GQ I K YLGV LD+
Sbjct: 756 KWGISVNAAKTGHVIY--------TLKNDIPTNLKTMKIKGQAIKKESKQSYLGVILDSK 807
Query: 337 MTFRPHIKKLEG 372
+T PH+ K+ G
Sbjct: 808 LTLSPHVTKVVG 819
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 47.2 bits (107), Expect = 8e-06
Identities = 39/139 (28%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Frame = +1
Query: 1 LFSLFINDIPRSPPTH--------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFR 156
L+S+F +D+P P +A +ADDT V S++ LQ A QW
Sbjct: 652 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 711
Query: 157 KWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDAS 336
W + IN K V F G+ I + KYLG+TLD
Sbjct: 712 NWNVRINAEKCANVTFANRTGSCPGVSLN-----------GRLIRHHQAYKYLGITLDRK 760
Query: 337 MTFRPHIKKLEGGPGTQFA 393
+TF HI ++ T+ A
Sbjct: 761 LTFSRHITNIQQAFRTKVA 779
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 47.2 bits (107), Expect = 8e-06
Identities = 39/139 (28%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Frame = +1
Query: 1 LFSLFINDIPRSPPTH--------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFR 156
L+S+F +D+P P +A +ADDT V S++ LQ A QW
Sbjct: 454 LYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAE 513
Query: 157 KWRIDINPAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDAS 336
W + IN K V F G+ I + KYLG+TLD
Sbjct: 514 NWNVRINAEKCANVTFANRTGSCPGVSLN-----------GRLIRHHQAYKYLGITLDRK 562
Query: 337 MTFRPHIKKLEGGPGTQFA 393
+TF HI ++ T+ A
Sbjct: 563 LTFSRHITNIQQAFRTKVA 581
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Frame = +1
Query: 28 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 201
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 275 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 334
Query: 202 FQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDASMTFRPHIKKLEG 372
F GQ + K +YLG+ LD +TF H+ L+G
Sbjct: 335 FS--------LKKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKG 383
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Frame = +1
Query: 28 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 201
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 202 FQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDASMTFRPHIKKLEG 372
F GQ + K +YLG+ LD +TF H+ L+G
Sbjct: 782 FS--------LKKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKG 830
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Frame = +1
Query: 28 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 201
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 202 FQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDASMTFRPHIKKLEG 372
F GQ + K +YLG+ LD +TF H+ L+G
Sbjct: 782 FS--------LKKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKG 830
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Frame = +1
Query: 28 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 201
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 202 FQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDASMTFRPHIKKLEG 372
F GQ + K +YLG+ LD +TF H+ L+G
Sbjct: 782 FS--------LKKEQTNIYTPPLINGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKG 830
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/120 (27%), Positives = 46/120 (38%)
Frame = +1
Query: 1 LFSLFINDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINP 180
L++L+ D P + FADDT + S+ L ++ +W WRI IN
Sbjct: 646 LYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINV 705
Query: 181 AKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDASMTFRPHIK 360
K V F IP +V YLGV LD +T+R HI+
Sbjct: 706 QKCKQVTFTLNKQTCPPLVLNNIC-----------IPQADEVTYLGVHLDRRLTWRKHIE 754
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/120 (27%), Positives = 46/120 (38%)
Frame = +1
Query: 1 LFSLFINDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINP 180
L++L+ D P + FADDT + S+ L ++ +W WRI IN
Sbjct: 646 LYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINV 705
Query: 181 AKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWVRKVKYLGVTLDASMTFRPHIK 360
K V F IP +V YLGV LD +T+R HI+
Sbjct: 706 QKCKQVTFTLNKQTCPPLVLNNIC-----------IPQADEVTYLGVHLDRRLTWRKHIE 754
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 277 GQPIPWVRKVKYLGVTLDASMTFRPHIKKL 366
G+ +P+VR +YLG+T+ M F HI L
Sbjct: 725 GRNLPYVRSCRYLGITVSEGMKFLTHIASL 754
>BT022556-1|AAY54972.1| 438|Drosophila melanogaster IP11886p
protein.
Length = 438
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Frame = -1
Query: 299 LTQGIGW------PKRVIGGVIFLLLMREEISGEFPL*NNTAVLFAGL 174
+T+ I W P I G+IF+L++ ++SG F + N T+ +FA L
Sbjct: 226 VTESISWRDFINVPTLKIFGLIFVLIICNQLSGSFAIFNYTSHIFAEL 273
>AE014297-579|AAF54047.1| 438|Drosophila melanogaster CG14606-PA
protein.
Length = 438
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Frame = -1
Query: 299 LTQGIGW------PKRVIGGVIFLLLMREEISGEFPL*NNTAVLFAGL 174
+T+ I W P I G+IF+L++ ++SG F + N T+ +FA L
Sbjct: 226 VTESISWRDFINVPTLKIFGLIFVLIICNQLSGSFAIFNYTSHIFAEL 273
>AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-PA
protein.
Length = 1833
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 99 VPNREEASERSPSPRTVVPKMAHRHQPG 182
VP REE SE + +P VVP R + G
Sbjct: 192 VPRREEESESTATPTPVVPDRPERSKSG 219
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,858,447
Number of Sequences: 53049
Number of extensions: 462473
Number of successful extensions: 1199
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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