Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3673
         (621 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   3.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   3.4  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   7.8  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 256 WIYFCSMIKMGSF 294
           W+YF SM+ +G+F
Sbjct: 357 WVYFISMVILGAF 369


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 196 ALVFQPFRCPAGLLQYIMSLRTDSFILAHSR 104
           A++ +P+RCP+G+  ++      + I A  R
Sbjct: 30  AMLSEPYRCPSGVNNWVSDSTGTAAIWASGR 60


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -1

Query: 183 NPSGVLLGCYNTSCHSERIHSSWLTVVTAVSFSGP 79
           +PS V  G Y T     + H SW   +   + + P
Sbjct: 182 HPSMVASGAYGTMSMHPQTHHSWAACMELAASADP 216


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,123
Number of Sequences: 2352
Number of extensions: 12855
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)