Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3667
(734 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 64 1e-11
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 59 6e-10
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 53 5e-08
SPCC4B3.12 |set9||histone lysine methyltransferase Set9|Schizosa... 30 0.39
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 6.4
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 25 8.5
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 25 8.5
SPBC336.14c |ppk26||serine/threonine protein kinase Ppk26|Schizo... 25 8.5
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 64.5 bits (150), Expect = 1e-11
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +1
Query: 187 GVIATRPFSRGQYVVEYAGELIGVAEARERERLYALDPEAGCYMYYFRHGDQQYCIDATA 366
G+ A + V+EY GE+I A RE+ Y + Y++ D+ +DAT
Sbjct: 794 GLFAMENIDKNDMVIEYIGEIIRQRVADNREKNYVREGIGDSYLFRI---DEDVIVDAT- 849
Query: 367 ESGRLGRLVNHSRNGNLHTKALWVDGPR-LVLIAAQDISPGDELTYDY 507
+ G + R +NHS N + + V+G R +V+ A +DI G+ELTYDY
Sbjct: 850 KKGNIARFINHSCAPNCIARIIRVEGKRKIVIYADRDIMHGEELTYDY 897
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 59.3 bits (137), Expect = 6e-10
Identities = 46/128 (35%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Frame = +1
Query: 133 REQREDGLQVAYF--EAKGRGVIATRPFSRGQYVVEYAGELIGVAEARERERLYALDPEA 306
R QR + +V F E KG G+ A + +V EY GE+I + R+R R Y D E
Sbjct: 173 RFQRHEFAKVDVFLTEKKGFGLRADANLPKDTFVYEYIGEVIPEQKFRKRMRQY--DSEG 230
Query: 307 GCYMYYFRHGDQQYCIDATAESGRLGRLVNHSRNGNLHTKALWV-DGPRLVLIAAQDISP 483
+ Y+ +Y IDAT + G L R NHS N + V D R+ + +DI
Sbjct: 231 IKHFYFMMLQKGEY-IDAT-KRGSLARFCNHSCRPNCYVDKWMVGDKLRMGIFCKRDIIR 288
Query: 484 GDELTYDY 507
G+ELT+DY
Sbjct: 289 GEELTFDY 296
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 52.8 bits (121), Expect = 5e-08
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Frame = +1
Query: 124 RAVREQREDGLQVAYFEAKGRGVIATRPFSRGQYVVEYAGELIGVAEARERERLYALDPE 303
R V+ R L++ + KG GV + R G ++ Y GE+I AEA +R++ Y D +
Sbjct: 320 RVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNY--DDD 377
Query: 304 AGCYMYYFRHGD--QQYCIDATAESGRLGRLVNHSRNGNLHT-KALWVDGPR----LVLI 462
Y++ D +Y +DA G + R NHS + N+ A+ G R L
Sbjct: 378 GITYLFDLDMFDDASEYTVDA-QNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFF 436
Query: 463 AAQDISPGDELTYDY 507
A +DI P +ELT+DY
Sbjct: 437 AIKDIQPLEELTFDY 451
>SPCC4B3.12 |set9||histone lysine methyltransferase
Set9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 441
Score = 29.9 bits (64), Expect = 0.39
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 385 RLVNHSRNGNLHTKALWVDGPRLVLIAAQDISPGDELTYDY 507
R VNH N N G R+ L +DI PG+E+T Y
Sbjct: 183 RFVNHDCNANCRFNT---SGKRIWLRCVRDIKPGEEITTFY 220
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 73 VRKTSKCVMAEKMRDLERAVREQREDGLQVAYFEAKGRGVIATRPFSRGQ 222
+R+ K V AE +E+ +R Q Q Y++ K G++ RG+
Sbjct: 642 LRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGK 691
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 25.4 bits (53), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 164 ATCNPSSLCSLTALSKSLIFSAMTHFDVFLTLLLTGKNSV 45
AT S C LT + + +S + +FD+ L+ K+SV
Sbjct: 639 ATFIDFSFCPLTTIDPAFSYSNLVYFDISHAKLIGLKDSV 678
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +2
Query: 329 DMEINSIVLMQLLSRDGWVDW*TTLATVIFTQRRCGWTGRDS 454
+ +++ L +LLS + W+D T+ +V R G++ + S
Sbjct: 958 NQNLSTATLKKLLSANTWMDLDKTMTSVTSLLNRTGFSSKSS 999
>SPBC336.14c |ppk26||serine/threonine protein kinase
Ppk26|Schizosaccharomyces pombe|chr 2|||Manual
Length = 589
Score = 25.4 bits (53), Expect = 8.5
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -3
Query: 423 CVKITVARVVHQSTQPSRLSSCINTILLIS 334
C K+T +R++ T+ R+S C + L++S
Sbjct: 356 CNKLTPSRILVDQTERIRISGCADYELVVS 385
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,786,160
Number of Sequences: 5004
Number of extensions: 53705
Number of successful extensions: 177
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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