Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3665
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical ... 133 9e-32
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membran... 64 6e-11
U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical p... 56 2e-08
Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 48 8e-06
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 48 8e-06
Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical p... 43 2e-04
AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical ... 43 2e-04
U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula (ubiq... 39 0.004
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 29 2.2
Z46933-4|CAA87037.1| 452|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 28 5.1
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical pr... 28 6.8
>AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical
protein F42G8.6 protein.
Length = 402
Score = 133 bits (322), Expect = 9e-32
Identities = 61/120 (50%), Positives = 81/120 (67%)
Frame = +1
Query: 301 RYSRQILLSDIGVEGQVKICSAKVLIVGAGGLGCPAAMYLAGAGIGEIGIVDYDAVDLTN 480
RYSRQ+L+ D GV GQ + + VLIVGAGGLGCP A YL AGIG IGIVDYD + L N
Sbjct: 17 RYSRQLLVDDFGVSGQKNLKNLNVLIVGAGGLGCPVATYLGAAGIGTIGIVDYDHISLDN 76
Query: 481 VHRQLLHHESNENTSKAFSAAESLRCINSKIKITPYNVQLDSKNAQQIASAYDLVLDCSD 660
+HRQ+ + E SKA + A++++ NS + + +N LDS NA Q+ Y++V DC+D
Sbjct: 77 LHRQVAYKEDQVGKSKAQALADNIKLQNSDLNVQVHNTSLDSSNAMQLFKNYEIVCDCTD 136
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/108 (31%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Frame = +1
Query: 340 EGQVKICSAKVLIVGAGGLGCPAAMYLAGAGIGEIGIVDYDAVDLTNVHRQLLHHESNEN 519
E KI +K+L++GAGG+GC LA G ++ ++D D +D++N++RQ L + + +
Sbjct: 6 EKHEKIVQSKILVIGAGGIGCELLKNLAVTGFRKVHVIDLDTIDISNLNRQFLFRKEHVS 65
Query: 520 TSKAFSAAESLRCINSKIKIT-PYNVQLDSKNAQQIASAYDLVLDCSD 660
+SKA +A + ++ +I++T ++ + K + AYD+VL+ D
Sbjct: 66 SSKAATATQVVKQFCPQIELTFDHDSIFEKKYNMEFFQAYDIVLNALD 113
>U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membrane
ruffles in embryoprotein 1 protein.
Length = 430
Score = 64.5 bits (150), Expect = 6e-11
Identities = 33/105 (31%), Positives = 60/105 (57%)
Frame = +1
Query: 334 GVEGQVKICSAKVLIVGAGGLGCPAAMYLAGAGIGEIGIVDYDAVDLTNVHRQLLHHESN 513
G E + + K+L++GAGGLGC LA +G I ++D D +D++N++RQ L ES+
Sbjct: 33 GPENFEALQNTKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNRQFLFRESD 92
Query: 514 ENTSKAFSAAESLRCINSKIKITPYNVQLDSKNAQQIASAYDLVL 648
SKA AA ++ ++T +N +++ K Q+ + +++
Sbjct: 93 VGKSKAEVAAAFVQQRVVGCQVTAHNCRIEDK-GQEFYRKFSIII 136
>U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical
protein T03F1.1 protein.
Length = 419
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Frame = +1
Query: 304 YSRQILLSDIGVEGQV-KICSAKVLIVGAGGLGCPAAMYLAGAGIGEIGIVDYDAVDLTN 480
YSR + L +G+ + +I V +VG GG+G A L GIG++ + DYD V++ N
Sbjct: 64 YSRLMALQRMGIVNEYERIREKTVAVVGVGGVGSVVAEMLTRCGIGKLILFDYDKVEIAN 123
Query: 481 VHRQLLHHESNENTSKAFSAAESLRCINSKIKITPYNVQL 600
++R L + + SK +A ++L +N ++I +N +
Sbjct: 124 MNR-LFYQPNQAGLSKVEAARDTLIHVNPDVQIEVHNFNI 162
>Z72502-6|CAA96591.1| 343|Caenorhabditis elegans Hypothetical
protein C08B6.9 protein.
Length = 343
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Frame = +1
Query: 304 YSRQILLSDIGVEGQVKICSAKVLIVGAGGLGCPAAMYLAGAGIGEIGIVDYDAVDLTNV 483
Y RQI L G+E Q KI ++KVLI+G LG A L+ AG+ E+ +VD+ VD +
Sbjct: 11 YDRQIRLW--GMEAQNKIRNSKVLIIGGKQLGAEVAKTLSLAGVDEMHLVDHRLVDTEEI 68
Query: 484 HRQLLHHESNENT--SKAFSAAESLRCINSKIKITPYNVQLDSKNAQQI 624
L+ S +N+ +K ++ L +N +K+ + SKN +I
Sbjct: 69 GMNFLYDASVDNSKMTKWAASYNFLYNLNRNVKLFIVEEDVLSKNDSEI 117
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 47.6 bits (108), Expect = 8e-06
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = +1
Query: 250 DASKSSVDGCLPKWAIERYSRQILLSDIGVEGQVKICSAKVLIVGAGGLGCPAAMYLAGA 429
D SK S C P+ + RY Q + G Q + + +VGAG +GC L+
Sbjct: 399 DNSKLSETDCQPRQS--RYDGQAAV--FGWPYQECLFRQRWFVVGAGAIGCELLKNLSMM 454
Query: 430 GI-----GEIGIVDYDAVDLTNVHRQLLHHESNENTSKAFSAAESLRCINSKIKI 579
G+ G I I D D ++++N++RQ L + K+ AA ++ NS ++I
Sbjct: 455 GVACGEGGLIKITDMDQIEISNLNRQFLFRRRDVGGKKSECAARAVTAFNSDVRI 509
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 47.6 bits (108), Expect = 8e-06
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = +1
Query: 250 DASKSSVDGCLPKWAIERYSRQILLSDIGVEGQVKICSAKVLIVGAGGLGCPAAMYLAGA 429
D SK S C P+ + RY Q + G Q + + +VGAG +GC L+
Sbjct: 484 DNSKLSETDCQPRQS--RYDGQAAV--FGWPYQECLFRQRWFVVGAGAIGCELLKNLSMM 539
Query: 430 GI-----GEIGIVDYDAVDLTNVHRQLLHHESNENTSKAFSAAESLRCINSKIKI 579
G+ G I I D D ++++N++RQ L + K+ AA ++ NS ++I
Sbjct: 540 GVACGEGGLIKITDMDQIEISNLNRQFLFRRRDVGGKKSECAARAVTAFNSDVRI 594
>Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 42.7 bits (96), Expect = 2e-04
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Frame = +1
Query: 217 KELNNHSQPIS-DASKSSVDGCLPKWAIERYSRQI---LLSDIGVEGQVKICSAKVLIVG 384
+ N+ QPIS D SK L + +++ I L DI +E + KVLI+G
Sbjct: 275 RNANDKLQPISVDLSKEFDPKILMERSVDLNLSLIKWRLHPDIQLE---RYSQLKVLILG 331
Query: 385 AGGLGCPAAMYLAGAGIGEIGIVDYDAVDLTNVHRQLL--HHESNENTSKAFSAAESLRC 558
AG LGC A L G G+ I +D V N RQ L ++ KA +A +++
Sbjct: 332 AGTLGCNIARCLIGWGVRHISFLDNSTVSYNNPVRQSLSEFEDARLGRGKAETAQAAIQR 391
Query: 559 INSKIKITPYNV 594
I I+ T + +
Sbjct: 392 IFPSIQATAHRL 403
>AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 42.7 bits (96), Expect = 2e-04
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
Frame = +1
Query: 217 KELNNHSQPIS-DASKSSVDGCLPKWAIERYSRQI---LLSDIGVEGQVKICSAKVLIVG 384
+ N+ QPIS D SK L + +++ I L DI +E + KVLI+G
Sbjct: 275 RNANDKLQPISVDLSKEFDPKILMERSVDLNLSLIKWRLHPDIQLE---RYSQLKVLILG 331
Query: 385 AGGLGCPAAMYLAGAGIGEIGIVDYDAVDLTNVHRQLL--HHESNENTSKAFSAAESLRC 558
AG LGC A L G G+ I +D V N RQ L ++ KA +A +++
Sbjct: 332 AGTLGCNIARCLIGWGVRHISFLDNSTVSYNNPVRQSLSEFEDARLGRGKAETAQAAIQR 391
Query: 559 INSKIKITPYNV 594
I I+ T + +
Sbjct: 392 IFPSIQATAHRL 403
>U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula
(ubiquitin activating)homolog protein 1 protein.
Length = 541
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/91 (27%), Positives = 40/91 (43%)
Frame = +1
Query: 301 RYSRQILLSDIGVEGQVKICSAKVLIVGAGGLGCPAAMYLAGAGIGEIGIVDYDAVDLTN 480
RY RQ+ L G EGQ I S ++G+ L L AG+ +VD V+ +
Sbjct: 9 RYDRQVRLW--GEEGQASIGSTSACVLGSDSLATEILKSLVLAGVQSFYVVDDAKVEQAD 66
Query: 481 VHRQLLHHESNENTSKAFSAAESLRCINSKI 573
+ + H + S+A + E L +N +
Sbjct: 67 IGQNFFLHADDIGRSRAEATLEKLTELNPSV 97
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 446 PISPMPAPARYMAAGHPRPPAPTISTFAEQILTCPSTP 333
P +P+P P + P PP P +S ++L P+TP
Sbjct: 154 PPTPIPTPVPILEPPPPPPPVPPLSPL-YKVLEIPATP 190
>Z46933-4|CAA87037.1| 452|Caenorhabditis elegans Hypothetical
protein F34H10.4 protein.
Length = 452
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 229 NHSQPISDASKSSVDGCL--PKWAIERYSRQILLSDIG 336
NH QP S S D P WAIE ++ + + ++G
Sbjct: 125 NHDQPAEQPSDKSTDDSTGYPPWAIEAFNSESNIKNVG 162
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 446 PISPMPAPARYMAAGHPRPPAPTISTFAEQILTC 345
P+ PAPA AA PPAP I+ A+ L C
Sbjct: 80 PVFAAPAPAPVFAAPFAAPPAPVIA--AQPALGC 111
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -2
Query: 440 SPMPAPARYMAAGHPRPPAPTISTFAEQILTCPSTPMSERRI 315
SP P PA + P PP P I+T + P P E+ I
Sbjct: 477 SPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPALEQEI 518
>Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical
protein C49F5.2 protein.
Length = 708
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 45 ECVFSCRCCSRKNIIKLIRNGQSQCFRDENIRTSQN 152
E V C+CCS+ ++ N CF S+N
Sbjct: 363 ENVIRCKCCSQDPVVNCFDNKDCPCFIANQFLQSRN 398
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,460,145
Number of Sequences: 27780
Number of extensions: 308067
Number of successful extensions: 1054
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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