Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3664
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131302-1|BAD18470.1| 626|Homo sapiens protein ( Homo sapiens ... 79 2e-14
BC000595-1|AAH00595.2| 729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 35 0.34
AB209595-1|BAD92832.1| 737|Homo sapiens DEAD box polypeptide 17... 35 0.34
BC112225-1|AAI12226.1| 470|Homo sapiens torsin A interacting pr... 31 3.2
BC101532-1|AAI01533.1| 470|Homo sapiens torsin A interacting pr... 31 3.2
AL359853-2|CAH70382.1| 470|Homo sapiens torsin A interacting pr... 31 3.2
AF464140-1|AAM50514.1| 470|Homo sapiens hypothetical protein pr... 31 3.2
L40407-1|AAC41742.1| 338|Homo sapiens thyroid receptor interact... 30 9.8
BT006743-1|AAP35389.1| 356|Homo sapiens nuclear factor of kappa... 30 9.8
BC015528-1|AAH15528.1| 356|Homo sapiens nuclear factor of kappa... 30 9.8
BC007197-1|AAH07197.1| 239|Homo sapiens Unknown (protein for IM... 30 9.8
AY736284-1|AAU10088.1| 356|Homo sapiens nuclear factor of kappa... 30 9.8
AK057862-1|BAB71599.1| 306|Homo sapiens protein ( Homo sapiens ... 30 9.8
AF451977-1|AAL49758.1| 1431|Homo sapiens cask-interacting protei... 30 9.8
AB209784-1|BAD93021.1| 361|Homo sapiens NF-kappaB inhibitor bet... 30 9.8
AB037727-1|BAA92544.1| 1154|Homo sapiens KIAA1306 protein protein. 30 9.8
>AK131302-1|BAD18470.1| 626|Homo sapiens protein ( Homo sapiens
cDNA FLJ16275 fis, clone NT2RI2027157, moderately
similar to Mouse SDR2 mRNA. ).
Length = 626
Score = 78.6 bits (185), Expect = 2e-14
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 5/167 (2%)
Frame = +3
Query: 69 MKVYACLCAAVVMLVMTSRVSEARSTGAPLSACRDMMPQHNATAQTSPPPYTITTDAQSV 248
M V ++L+ S V+ + G +C M+P+H + Q S P + I +
Sbjct: 1 MAVSGFTLGTCILLLHISYVANYPN-GKVTQSCHGMIPEHGHSPQ-SVPVHDIYVSQMTF 58
Query: 249 APGDSVEVVIAGKLPEDTLRGYLLQARQGDDI----LGTFSLEDGDVFSQLINCGK-PGN 413
PGD +EV ++G +G+LL+AR +D+ +G+F+L D +V SQL+ C G+
Sbjct: 59 RPGDQIEVTLSGH----PFKGFLLEARNAEDLNGPPIGSFTLIDSEV-SQLLTCEDIQGS 113
Query: 414 AVTHKKHDNKEDKRQVRVRWSPPQGLTGEVVFRATIVKTLKVFWVGV 554
AV+H+ + K +++V W+ P F T+V+ K++WV +
Sbjct: 114 AVSHR---SASKKTEIKVYWNAPSSAPNHTQFLVTVVEKYKIYWVKI 157
>BC000595-1|AAH00595.2| 729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 17 protein.
Length = 729
Score = 34.7 bits (76), Expect = 0.34
Identities = 28/104 (26%), Positives = 37/104 (35%)
Frame = +3
Query: 135 ARSTGAPLSACRDMMPQHNATAQTSPPPYTITTDAQSVAPGDSVEVVIAGKLPEDTLRGY 314
A +TG S P TA+ +PPP +T P ++ + P T+RG
Sbjct: 25 ASATGDSASERESAAPAAAPTAE-APPPSVVTRPEPQALPSPAIRAPLPDLYPFGTMRGG 83
Query: 315 LLQARQGDDILGTFSLEDGDVFSQLINCGKPGNAVTHKKHDNKE 446
R D G F G G PG + KK D E
Sbjct: 84 GFGDRDRDRDRGGFGARGGGGLPPK-KFGNPGERLRKKKWDLSE 126
>AB209595-1|BAD92832.1| 737|Homo sapiens DEAD box polypeptide 17
isoform p82 variant protein.
Length = 737
Score = 34.7 bits (76), Expect = 0.34
Identities = 28/104 (26%), Positives = 37/104 (35%)
Frame = +3
Query: 135 ARSTGAPLSACRDMMPQHNATAQTSPPPYTITTDAQSVAPGDSVEVVIAGKLPEDTLRGY 314
A +TG S P TA+ +PPP +T P ++ + P T+RG
Sbjct: 27 ASATGDSASERESAAPAAAPTAE-APPPSVVTRPEPQALPSPAIRAPLPDLYPFGTMRGG 85
Query: 315 LLQARQGDDILGTFSLEDGDVFSQLINCGKPGNAVTHKKHDNKE 446
R D G F G G PG + KK D E
Sbjct: 86 GFGDRDRDRDRGGFGARGGGGLPPK-KFGNPGERLRKKKWDLSE 128
>BC112225-1|AAI12226.1| 470|Homo sapiens torsin A interacting
protein 2 protein.
Length = 470
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 551 SDPEDLQCLDDGGAEHDLPGETLGRRPAHP 462
++ E+ Q DGG H LP E LG+ P P
Sbjct: 86 TEDENKQSFLDGGKGHHLPSENLGKEPLDP 115
>BC101532-1|AAI01533.1| 470|Homo sapiens torsin A interacting
protein 2 protein.
Length = 470
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 551 SDPEDLQCLDDGGAEHDLPGETLGRRPAHP 462
++ E+ Q DGG H LP E LG+ P P
Sbjct: 86 TEDENKQSFLDGGKGHHLPSENLGKEPLDP 115
>AL359853-2|CAH70382.1| 470|Homo sapiens torsin A interacting
protein 2 protein.
Length = 470
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 551 SDPEDLQCLDDGGAEHDLPGETLGRRPAHP 462
++ E+ Q DGG H LP E LG+ P P
Sbjct: 86 TEDENKQSFLDGGKGHHLPSENLGKEPLDP 115
>AF464140-1|AAM50514.1| 470|Homo sapiens hypothetical protein
protein.
Length = 470
Score = 31.5 bits (68), Expect = 3.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 551 SDPEDLQCLDDGGAEHDLPGETLGRRPAHP 462
++ E+ Q DGG H LP E LG+ P P
Sbjct: 86 TEDENKQSFLDGGKGHHLPSENLGKEPLDP 115
>L40407-1|AAC41742.1| 338|Homo sapiens thyroid receptor interactor
protein.
Length = 338
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 557 LYSDPEDLQCLDDGGAEHDLPGETLGRRPAH 465
++ D E ++ L D GA+ D P T GR P H
Sbjct: 216 IHKDVEMVRLLRDAGADLDKPEPTCGRSPLH 246
>BT006743-1|AAP35389.1| 356|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells inhibitor, b
protein.
Length = 356
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 557 LYSDPEDLQCLDDGGAEHDLPGETLGRRPAH 465
++ D E ++ L D GA+ D P T GR P H
Sbjct: 216 IHKDVEMVRLLRDAGADLDKPEPTCGRSPLH 246
>BC015528-1|AAH15528.1| 356|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells inhibitor, b
protein.
Length = 356
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 557 LYSDPEDLQCLDDGGAEHDLPGETLGRRPAH 465
++ D E ++ L D GA+ D P T GR P H
Sbjct: 216 IHKDVEMVRLLRDAGADLDKPEPTCGRSPLH 246
>BC007197-1|AAH07197.1| 239|Homo sapiens Unknown (protein for
IMAGE:3631962) protein.
Length = 239
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 557 LYSDPEDLQCLDDGGAEHDLPGETLGRRPAH 465
++ D E ++ L D GA+ D P T GR P H
Sbjct: 117 IHKDVEMVRLLRDAGADLDKPEPTCGRSPLH 147
>AY736284-1|AAU10088.1| 356|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells inhibitor, b
protein.
Length = 356
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 557 LYSDPEDLQCLDDGGAEHDLPGETLGRRPAH 465
++ D E ++ L D GA+ D P T GR P H
Sbjct: 216 IHKDVEMVRLLRDAGADLDKPEPTCGRSPLH 246
>AK057862-1|BAB71599.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ25133 fis, clone CBR06869, highly similar to
THYROID RECEPTOR INTERACTING PROTEIN 9. ).
Length = 306
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 557 LYSDPEDLQCLDDGGAEHDLPGETLGRRPAH 465
++ D E ++ L D GA+ D P T GR P H
Sbjct: 184 IHKDVEMVRLLRDAGADLDKPEPTCGRSPLH 214
>AF451977-1|AAL49758.1| 1431|Homo sapiens cask-interacting protein 1
protein.
Length = 1431
Score = 29.9 bits (64), Expect = 9.8
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +3
Query: 123 RVSEARSTGAPLSACRDMMPQHNATAQT---SPPPYTITTDAQSVAPGDSVEVVIAGKLP 293
RV + S AP A +++ + + PPP + ++A + + + P
Sbjct: 913 RVGRSHSVRAPAGADKNVNRSQSFAVRPRKKGPPPPPPKRSSSALASANLADEPVPDAEP 972
Query: 294 EDTLRGYLLQARQGDDILGT 353
ED L G Q R+ D+ G+
Sbjct: 973 EDGLLGVRAQCRRASDLAGS 992
>AB209784-1|BAD93021.1| 361|Homo sapiens NF-kappaB inhibitor beta
variant protein.
Length = 361
Score = 29.9 bits (64), Expect = 9.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 557 LYSDPEDLQCLDDGGAEHDLPGETLGRRPAH 465
++ D E ++ L D GA+ D P T GR P H
Sbjct: 239 IHKDVEMVRLLRDAGADLDKPEPTCGRSPLH 269
>AB037727-1|BAA92544.1| 1154|Homo sapiens KIAA1306 protein protein.
Length = 1154
Score = 29.9 bits (64), Expect = 9.8
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +3
Query: 123 RVSEARSTGAPLSACRDMMPQHNATAQT---SPPPYTITTDAQSVAPGDSVEVVIAGKLP 293
RV + S AP A +++ + + PPP + ++A + + + P
Sbjct: 636 RVGRSHSVRAPAGADKNVNRSQSFAVRPRKKGPPPPPPKRSSSALASANLADEPVPDAEP 695
Query: 294 EDTLRGYLLQARQGDDILGT 353
ED L G Q R+ D+ G+
Sbjct: 696 EDGLLGVRAQCRRASDLAGS 715
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,972,391
Number of Sequences: 237096
Number of extensions: 1709695
Number of successful extensions: 5750
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5748
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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