Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3662
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical p...   128   5e-30
U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z35639-2|CAA84694.1|  351|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AF063007-1|AAC16430.2|  730|Caenorhabditis elegans Hypothetical ...    27   9.6  

>Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical
           protein F22D6.3a protein.
          Length = 545

 Score =  128 bits (308), Expect = 5e-30
 Identities = 68/156 (43%), Positives = 95/156 (60%)
 Frame = +3

Query: 201 KPFKTILKAMHHAGKEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDXXXX 380
           +P  T+++AM    K     +     ++ + ++ AAK+ +KK  K +  E  K       
Sbjct: 21  QPLATLVQAML-ISKNSGEFLMKKKSEEGESWEPAAKAAIKKAVKKYEAEVKKLEKAGCR 79

Query: 381 XXXXXXXRSQNLDEAKKILLQEDPSLPKATVVKICETTEHRGQRICIRGWVHRLRRQGKS 560
                  +   L+EAKKI    D SLP+A V+KI E+ +HR QR+ I+ WVHRLRRQGKS
Sbjct: 80  EKEAEEAQHAALEEAKKITFSLDKSLPEAKVIKIGESVQHRDQRVSIKAWVHRLRRQGKS 139

Query: 561 LAFLTLRDGTGYLQCVLHGTLCQTYNALVLSTESSV 668
           L FL LRDG G+LQCVL+  LCQ+Y+A+ LSTE+SV
Sbjct: 140 LMFLVLRDGYGFLQCVLNDKLCQSYDAVTLSTETSV 175


>U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical
           protein C28F5.4 protein.
          Length = 856

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 201 KPFKTILKAMHHAGKEPFPTIYVDSKDDTK 290
           K F+T LK  HHA   P    Y+ SK D K
Sbjct: 411 KNFETALKTSHHAFNLPEKNEYIPSKFDQK 440


>Z35639-2|CAA84694.1|  351|Caenorhabditis elegans Hypothetical
           protein D2045.5 protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 240 GKEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIW 341
           G+E F  + +  K    DY VA K Q+ K  KIW
Sbjct: 305 GEEMFTALSISEKRAPNDYKVATKMQMAK--KIW 336


>AF063007-1|AAC16430.2|  730|Caenorhabditis elegans Hypothetical
           protein R119.1 protein.
          Length = 730

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 408 QNLDEAKKILLQEDPSLPKATVVKICETTE 497
           +NLD       QED  LP+    K+C+ TE
Sbjct: 653 ENLDPMDYCTCQEDEILPEDPCFKVCDITE 682


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,760,338
Number of Sequences: 27780
Number of extensions: 316261
Number of successful extensions: 702
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)