Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3662
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.8  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   6.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   6.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   6.4  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   8.4  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 237 AGKEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVR--ENYKAMD 368
           AGKE + T+  D       +D +  +        W+R  ENYK ++
Sbjct: 403 AGKENYQTMSRDPARTPFQWDDSVSAGFSSSSNTWLRVNENYKTVN 448


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 237 AGKEPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVR--ENYKAMD 368
           AGKE + T+  D       +D +  +        W+R  ENYK ++
Sbjct: 403 AGKENYQTMSRDPARTPFQWDDSVSAGFSSSSNTWLRVNENYKTVN 448


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 218 FESNASCWQRTISHNL 265
           F  NA+ W+  + HNL
Sbjct: 541 FRRNAATWKNAVRHNL 556


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 246 EPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVREN 353
           +P+P       DD      A+K  + K  ++WV ++
Sbjct: 105 QPYPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLDS 140


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 246 EPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVREN 353
           +P+P       DD      A+K  + K  ++WV ++
Sbjct: 105 QPYPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLDS 140


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 246 EPFPTIYVDSKDDTKDYDVAAKSQLKKIQKIWVREN 353
           +P+P       DD      A+K  + K  ++WV ++
Sbjct: 105 QPYPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLDS 140


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 583 MVLGTYSAFYMVHFVRPTML*SYL 654
           +++   + FY V+ + PT+L S+L
Sbjct: 227 IIIRRKTLFYTVNLILPTVLISFL 250


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,638
Number of Sequences: 438
Number of extensions: 3544
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)