Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3659
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069803-1|AAL39948.1|  856|Drosophila melanogaster SD04280p pro...    29   4.5  
AE014298-3176|AAN09565.1|  856|Drosophila melanogaster CG14619-P...    29   4.5  
AE014298-3175|AAN09564.1|  856|Drosophila melanogaster CG14619-P...    29   4.5  
AE014298-3174|AAF50952.2|  856|Drosophila melanogaster CG14619-P...    29   4.5  
U43090-1|AAC47303.1| 1505|Drosophila melanogaster similar protein.     29   7.9  
BT016132-1|AAV37017.1|  776|Drosophila melanogaster GH16921p pro...    29   7.9  
AE014297-4537|AAF57008.2| 1507|Drosophila melanogaster CG7951-PA...    29   7.9  

>AY069803-1|AAL39948.1|  856|Drosophila melanogaster SD04280p
           protein.
          Length = 856

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -2

Query: 296 KHRSPSSSNPSLATNGSTS--ELTHRHSPLSFSPDLLSESRYRSG 168
           K  S SSS+PSLA   +TS  ++  ++SP ++ P+    SR RSG
Sbjct: 231 KRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPN-CELSRSRSG 274


>AE014298-3176|AAN09565.1|  856|Drosophila melanogaster CG14619-PE,
           isoform E protein.
          Length = 856

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -2

Query: 296 KHRSPSSSNPSLATNGSTS--ELTHRHSPLSFSPDLLSESRYRSG 168
           K  S SSS+PSLA   +TS  ++  ++SP ++ P+    SR RSG
Sbjct: 231 KRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPN-CELSRSRSG 274


>AE014298-3175|AAN09564.1|  856|Drosophila melanogaster CG14619-PD,
           isoform D protein.
          Length = 856

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -2

Query: 296 KHRSPSSSNPSLATNGSTS--ELTHRHSPLSFSPDLLSESRYRSG 168
           K  S SSS+PSLA   +TS  ++  ++SP ++ P+    SR RSG
Sbjct: 231 KRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPN-CELSRSRSG 274


>AE014298-3174|AAF50952.2|  856|Drosophila melanogaster CG14619-PA,
           isoform A protein.
          Length = 856

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -2

Query: 296 KHRSPSSSNPSLATNGSTS--ELTHRHSPLSFSPDLLSESRYRSG 168
           K  S SSS+PSLA   +TS  ++  ++SP ++ P+    SR RSG
Sbjct: 231 KRLSSSSSSPSLARLVATSGLDIYEKYSPANYKPN-CELSRSRSG 274


>U43090-1|AAC47303.1| 1505|Drosophila melanogaster similar protein.
          Length = 1505

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = -2

Query: 293 HRSPSSSNPSLATNGSTSELTHRHSPLS 210
           ++SPSSS+ S  +N S+S  ++ +SPLS
Sbjct: 716 YQSPSSSSTSAPSNTSSSNNSYANSPLS 743


>BT016132-1|AAV37017.1|  776|Drosophila melanogaster GH16921p
           protein.
          Length = 776

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = -2

Query: 293 HRSPSSSNPSLATNGSTSELTHRHSPLS 210
           ++SPSSS+ S  +N S+S  ++ +SPLS
Sbjct: 716 YQSPSSSSTSAPSNTSSSNNSYANSPLS 743


>AE014297-4537|AAF57008.2| 1507|Drosophila melanogaster CG7951-PA
           protein.
          Length = 1507

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = -2

Query: 293 HRSPSSSNPSLATNGSTSELTHRHSPLS 210
           ++SPSSS+ S  +N S+S  ++ +SPLS
Sbjct: 716 YQSPSSSSTSAPSNTSSSNNSYANSPLS 743


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,998,176
Number of Sequences: 53049
Number of extensions: 438980
Number of successful extensions: 1304
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)