Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3659
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   4.8  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   4.8  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   4.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   4.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   4.8  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   8.3  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   8.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   8.3  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -1

Query: 546 YVSLLRYSTVPSNL 505
           +V++LRY+ VPS+L
Sbjct: 77  FVTMLRYNGVPSSL 90


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 302 YYKHRSPSSSNPSLATNGSTSEL 234
           Y+ +R P   N   A NG  S L
Sbjct: 24  YHPYRQPDGMNQCQAVNGHCSHL 46


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 302 YYKHRSPSSSNPSLATNGSTSEL 234
           Y+ +R P   N   A NG  S L
Sbjct: 24  YHPYRQPDGMNQCQAVNGHCSHL 46


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -1

Query: 546 YVSLLRYSTVPSNL 505
           +V++LRY+ VPS+L
Sbjct: 77  FVTMLRYNGVPSSL 90


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -1

Query: 546 YVSLLRYSTVPSNL 505
           +V++LRY+ VPS+L
Sbjct: 77  FVTMLRYNGVPSSL 90


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 104 GPQTGVIVTLTLARAVLR 157
           G  TG+I  LTL R +LR
Sbjct: 209 GGLTGLIGCLTLGRRILR 226


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 498 RGISYWGRCYILINLHK 548
           R +S W   YIL NL K
Sbjct: 227 RYVSQWEEVYILQNLQK 243


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 546 YVSLLRYSTVPSNL 505
           +V++LRY  VPS L
Sbjct: 78  FVTILRYDGVPSTL 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,885
Number of Sequences: 438
Number of extensions: 3101
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)