Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3658
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensit...    29   7.8  
U02296-1|AAD10615.1|  581|Drosophila melanogaster cocaine-sensit...    29   7.8  
AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p pro...    29   7.8  
AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA...    29   7.8  

>U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensitive
           serotonin transporterprotein.
          Length = 622

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 282 ITWAL*CSSHYINPLYIIQRWLFKATNNIRILLQ 181
           + WA+ CSS    P+YII ++ F +    R  LQ
Sbjct: 568 VGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQ 601


>U02296-1|AAD10615.1|  581|Drosophila melanogaster cocaine-sensitive
           serotonin transporterprotein.
          Length = 581

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 282 ITWAL*CSSHYINPLYIIQRWLFKATNNIRILLQ 181
           + WA+ CSS    P+YII ++ F +    R  LQ
Sbjct: 527 VGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQ 560


>AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p
           protein.
          Length = 622

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 282 ITWAL*CSSHYINPLYIIQRWLFKATNNIRILLQ 181
           + WA+ CSS    P+YII ++ F +    R  LQ
Sbjct: 568 VGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQ 601


>AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA
           protein.
          Length = 622

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 282 ITWAL*CSSHYINPLYIIQRWLFKATNNIRILLQ 181
           + WA+ CSS    P+YII ++ F +    R  LQ
Sbjct: 568 VGWAVTCSSVLCIPMYIIYKFFFASKGGCRQRLQ 601


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,197,759
Number of Sequences: 53049
Number of extensions: 528537
Number of successful extensions: 769
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)