Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3657
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50916-1|BAA09475.2| 1075|Homo sapiens KIAA0126 protein. 32 1.7
BC112367-1|AAI12368.1| 1066|Homo sapiens UBE4A protein protein. 32 1.7
BC111417-1|AAI11418.1| 1066|Homo sapiens UBE4A protein protein. 32 1.7
BC062695-1|AAH62695.1| 484|Homo sapiens UBE4A protein protein. 32 1.7
BC060796-1|AAH60796.1| 684|Homo sapiens coiled-coil domain cont... 32 1.7
BC052643-1|AAH52643.1| 351|Homo sapiens UBE4A protein protein. 32 1.7
AK124633-1|BAC85909.1| 445|Homo sapiens protein ( Homo sapiens ... 32 1.7
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot... 32 2.3
AC005542-2|AAC32904.1| 461|Homo sapiens KIAA0589, partial CDS p... 32 2.3
AB011161-1|BAA25515.1| 687|Homo sapiens KIAA0589 protein protein. 32 2.3
DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated... 31 3.0
AB029032-1|BAA83061.2| 3086|Homo sapiens KIAA1109 protein protein. 31 3.0
BC030973-1|AAH30973.1| 392|Homo sapiens UBE4A protein protein. 31 4.0
DQ363529-1|ABC88012.1| 1099|Homo sapiens low-voltage-activated c... 30 6.9
DQ363528-1|ABC88011.1| 1083|Homo sapiens low-voltage-activated c... 30 6.9
DQ363527-1|ABC88010.1| 1088|Homo sapiens low-voltage-activated c... 30 6.9
DQ363526-1|ABC88009.1| 1077|Homo sapiens low-voltage-activated c... 30 6.9
AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel, voltag... 30 6.9
AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated c... 30 6.9
AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated c... 30 6.9
AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel ... 30 6.9
AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-typ... 30 6.9
AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein. 30 9.1
>D50916-1|BAA09475.2| 1075|Homo sapiens KIAA0126 protein.
Length = 1075
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 307 IFFAELDLNDFFLGSGGGVPSRSLHVPESKVSLGEH*PLDIT 182
IF LD +D L SG G+PSR +++ E V L + LD++
Sbjct: 93 IFLITLDNSDPSLKSGNGIPSRCVYLEEMAVELEDQDWLDMS 134
>BC112367-1|AAI12368.1| 1066|Homo sapiens UBE4A protein protein.
Length = 1066
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 307 IFFAELDLNDFFLGSGGGVPSRSLHVPESKVSLGEH*PLDIT 182
IF LD +D L SG G+PSR +++ E V L + LD++
Sbjct: 91 IFLITLDNSDPSLKSGNGIPSRCVYLEEMAVELEDQDWLDMS 132
>BC111417-1|AAI11418.1| 1066|Homo sapiens UBE4A protein protein.
Length = 1066
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 307 IFFAELDLNDFFLGSGGGVPSRSLHVPESKVSLGEH*PLDIT 182
IF LD +D L SG G+PSR +++ E V L + LD++
Sbjct: 91 IFLITLDNSDPSLKSGNGIPSRCVYLEEMAVELEDQDWLDMS 132
>BC062695-1|AAH62695.1| 484|Homo sapiens UBE4A protein protein.
Length = 484
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 307 IFFAELDLNDFFLGSGGGVPSRSLHVPESKVSLGEH*PLDIT 182
IF LD +D L SG G+PSR +++ E V L + LD++
Sbjct: 91 IFLITLDNSDPSLKSGNGIPSRCVYLEEMAVELEDQDWLDMS 132
>BC060796-1|AAH60796.1| 684|Homo sapiens coiled-coil domain
containing 62 protein.
Length = 684
Score = 32.3 bits (70), Expect = 1.7
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Frame = +3
Query: 387 SLNSSEFSGSVHTDESHSDYGKKDKKLDIPVAPVMPVFNKTA-----VKDSFLPQGLLQD 551
SL SS+ ++ DE+ S KK+ + + P FN+ A +D F P LQ
Sbjct: 579 SLGSSK--SALREDETESSSNKKNSPTSLLIYKDAPAFNEKASIVLPSQDDFSPTSKLQR 636
Query: 552 IRDRSAKLSTVETESQNNEHDNEETNQNINEDANVPKESAQ 674
+ S ++ T S +E + + VP+ESAQ
Sbjct: 637 LLAESRQMVTDLELSTLLPISHENLTGSATNKSEVPEESAQ 677
>BC052643-1|AAH52643.1| 351|Homo sapiens UBE4A protein protein.
Length = 351
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 307 IFFAELDLNDFFLGSGGGVPSRSLHVPESKVSLGEH*PLDIT 182
IF LD +D L SG G+PSR +++ E V L + LD++
Sbjct: 91 IFLITLDNSDPSLKSGNGIPSRCVYLEEMAVELEDQDWLDMS 132
>AK124633-1|BAC85909.1| 445|Homo sapiens protein ( Homo sapiens
cDNA FLJ42642 fis, clone BRACE3025457, highly similar
to Homo sapiens testis-specific protein TSP-NY (TSP-NY).
).
Length = 445
Score = 32.3 bits (70), Expect = 1.7
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Frame = +3
Query: 387 SLNSSEFSGSVHTDESHSDYGKKDKKLDIPVAPVMPVFNKTA-----VKDSFLPQGLLQD 551
SL SS+ ++ DE+ S KK+ + + P FN+ A +D F P LQ
Sbjct: 340 SLGSSK--SALREDETESSSNKKNSPTSLLIYKDAPAFNEKASIVLPSQDDFSPTSKLQR 397
Query: 552 IRDRSAKLSTVETESQNNEHDNEETNQNINEDANVPKESAQ 674
+ S ++ T S +E + + VP+ESAQ
Sbjct: 398 LLAESRQMVTDLELSTLLPISHENLTGSATNKSEVPEESAQ 438
>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
precursor protein.
Length = 1253
Score = 31.9 bits (69), Expect = 2.3
Identities = 27/112 (24%), Positives = 49/112 (43%)
Frame = +3
Query: 336 SQGELDFEDNDSNISCDSLNSSEFSGSVHTDESHSDYGKKDKKLDIPVAPVMPVFNKTAV 515
S D D+DS+ S DS NSS+ S S ++ +S SD D + N +
Sbjct: 809 SSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDS-SDSSDSSDSSDSDSSNRSDSSNSSDS 867
Query: 516 KDSFLPQGLLQDIRDRSAKLSTVETESQNNEHDNEETNQNINEDANVPKESA 671
DS D D S + E+ + ++ D+ ++ + + D++ +S+
Sbjct: 868 SDS-SDSSNSSDSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSS 918
>AC005542-2|AAC32904.1| 461|Homo sapiens KIAA0589, partial CDS
protein.
Length = 461
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 470 YTSRAGDASVQQNGRQRQLSAARSTSRHQRPLGQ 571
Y+ G ++ Q+ R+RQ A+STS +RP+GQ
Sbjct: 110 YSLLLGVHNIDQHERERQAQGAQSTSDEKRPVGQ 143
>AB011161-1|BAA25515.1| 687|Homo sapiens KIAA0589 protein protein.
Length = 687
Score = 31.9 bits (69), Expect = 2.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 470 YTSRAGDASVQQNGRQRQLSAARSTSRHQRPLGQ 571
Y+ G ++ Q+ R+RQ A+STS +RP+GQ
Sbjct: 336 YSLLLGVHNIDQHERERQAQGAQSTSDEKRPVGQ 369
>DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated
protein protein.
Length = 5005
Score = 31.5 bits (68), Expect = 3.0
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 363 NDSNISCDSLN-SSEFSGSVHTDESHSDYGKKDKKLDIPVAPVMP 494
+D N+ CD + SS+ +G+ +DE D K D+P+ P P
Sbjct: 1950 SDDNLPCDRTSPSSDLNGNSVSDEQDEGVESDDLKKDLPLMPPPP 1994
>AB029032-1|BAA83061.2| 3086|Homo sapiens KIAA1109 protein protein.
Length = 3086
Score = 31.5 bits (68), Expect = 3.0
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 363 NDSNISCDSLN-SSEFSGSVHTDESHSDYGKKDKKLDIPVAPVMP 494
+D N+ CD + SS+ +G+ +DE D K D+P+ P P
Sbjct: 31 SDDNLPCDRTSPSSDLNGNSVSDEQDEGVESDDLKKDLPLMPPPP 75
>BC030973-1|AAH30973.1| 392|Homo sapiens UBE4A protein protein.
Length = 392
Score = 31.1 bits (67), Expect = 4.0
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -3
Query: 307 IFFAELDLNDFFLGSGGGVPSRSLHVPESKVSLGEH*PLDIT 182
IF LD +D L SG G+P+R +++ E V L + LD++
Sbjct: 91 IFLITLDNSDPSLKSGNGIPNRCVYLEEMAVELEDQDWLDMS 132
>DQ363529-1|ABC88012.1| 1099|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 577
protein.
Length = 1099
Score = 30.3 bits (65), Expect = 6.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 488 HRRDWYIEFLIFLAIVTVTFVGVNAPAEFTAVQRIARYVRVVIFKI*FALAAVA 327
H D +I F+I + ++T++ N P + YV ++F AL VA
Sbjct: 363 HYLDLFITFIICVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVA 416
>DQ363528-1|ABC88011.1| 1083|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 544
protein.
Length = 1083
Score = 30.3 bits (65), Expect = 6.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 488 HRRDWYIEFLIFLAIVTVTFVGVNAPAEFTAVQRIARYVRVVIFKI*FALAAVA 327
H D +I F+I + ++T++ N P + YV ++F AL VA
Sbjct: 358 HYLDLFITFIICVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVA 411
>DQ363527-1|ABC88010.1| 1088|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 513
protein.
Length = 1088
Score = 30.3 bits (65), Expect = 6.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 488 HRRDWYIEFLIFLAIVTVTFVGVNAPAEFTAVQRIARYVRVVIFKI*FALAAVA 327
H D +I F+I + ++T++ N P + YV ++F AL VA
Sbjct: 352 HYLDLFITFIICVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVA 405
>DQ363526-1|ABC88009.1| 1077|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 512
protein.
Length = 1077
Score = 30.3 bits (65), Expect = 6.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 488 HRRDWYIEFLIFLAIVTVTFVGVNAPAEFTAVQRIARYVRVVIFKI*FALAAVA 327
H D +I F+I + ++T++ N P + YV ++F AL VA
Sbjct: 352 HYLDLFITFIICVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVA 405
>AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel,
voltage-dependent, T type, alphant regulator of
chromatin, sub protein.
Length = 2347
Score = 30.3 bits (65), Expect = 6.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 488 HRRDWYIEFLIFLAIVTVTFVGVNAPAEFTAVQRIARYVRVVIFKI*FALAAVA 327
H D +I F+I + ++T++ N P + YV ++F AL VA
Sbjct: 1611 HYLDLFITFIICVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVA 1664
>AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated
calcium channel alpha13.2 subunit delta25B splice
variant protein.
Length = 1536
Score = 30.3 bits (65), Expect = 6.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 488 HRRDWYIEFLIFLAIVTVTFVGVNAPAEFTAVQRIARYVRVVIFKI*FALAAVA 327
H D +I F+I + ++T++ N P + YV ++F AL VA
Sbjct: 800 HYLDLFITFIICVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVA 853
>AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated
calcium channel alpha 1H protein.
Length = 2353
Score = 30.3 bits (65), Expect = 6.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 488 HRRDWYIEFLIFLAIVTVTFVGVNAPAEFTAVQRIARYVRVVIFKI*FALAAVA 327
H D +I F+I + ++T++ N P + YV ++F AL VA
Sbjct: 1617 HYLDLFITFIICVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVA 1670
>AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel alpha
1H subunit protein.
Length = 2353
Score = 30.3 bits (65), Expect = 6.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 488 HRRDWYIEFLIFLAIVTVTFVGVNAPAEFTAVQRIARYVRVVIFKI*FALAAVA 327
H D +I F+I + ++T++ N P + YV ++F AL VA
Sbjct: 1617 HYLDLFITFIICVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVA 1670
>AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-type
calcium channel alpha-1H subunit protein.
Length = 2373
Score = 30.3 bits (65), Expect = 6.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 488 HRRDWYIEFLIFLAIVTVTFVGVNAPAEFTAVQRIARYVRVVIFKI*FALAAVA 327
H D +I F+I + ++T++ N P + YV ++F AL VA
Sbjct: 1637 HYLDLFITFIICVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVA 1690
>AF094508-1|AAD16120.1| 788|Homo sapiens dentin phosphoryn protein.
Length = 788
Score = 29.9 bits (64), Expect = 9.1
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = +3
Query: 336 SQGELDFEDNDSNISCDSLNSSEFSGSVHTDESHSDYGKKDKKLDIPVAPVMPVFNKTAV 515
S D D+DS+ S DS NSS+ S S ++ +S SD D + N +
Sbjct: 347 SSDSSDSSDSDSSNSSDSSNSSDSSDSCNSSDS-SDSSDSSDGSDSDSSNRSDSSNSSDS 405
Query: 516 KDSFLPQGL--LQDIRDRSAKLSTVETESQNNEHDNEETNQNINEDANVPKESA 671
DS D D + ++ ++ +N D++ ++ + + D++ S+
Sbjct: 406 SDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSS 459
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,947,483
Number of Sequences: 237096
Number of extensions: 1665469
Number of successful extensions: 5379
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5377
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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